CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005144.1-P	Field mustard	cytosol	97.58	97.82
CDX91423	Canola	cytosol	96.37	95.9
AT2G38000.1	Thale cress	cytosol	86.92	85.68
KRH49254	Soybean	endoplasmic reticulum	64.89	62.76
VIT_08s0007g01660.t01	Wine grape	cytosol	63.92	61.11
Solyc09g011880.2.1	Tomato	nucleus	63.68	61.02
PGSC0003DMT400052379	Potato	cytosol	63.44	60.51
GSMUA_Achr6P14970_001	Banana	nucleus	58.35	55.66
TraesCS2A01G136800.1	Wheat	nucleus	55.69	53.99
OQU83401	Sorghum	nucleus	57.63	51.85
TraesCS2B01G160700.1	Wheat	nucleus	56.9	50.87
HORVU2Hr1G024150.5	Barley	nucleus	56.66	50.32
TraesCS2D01G139500.1	Wheat	nucleus	56.66	50.21
Os05t0316200-01	Rice	cytosol, nucleus, plastid	56.9	50.21
TraesCS2A01G136700.1	Wheat	nucleus	52.78	48.02
TraesCS2D01G139400.1	Wheat	nucleus	53.03	47.92
TraesCS2B01G160600.1	Wheat	nucleus	52.3	47.68
HORVU2Hr1G024160.1	Barley	cytosol	49.64	45.25
Zm00001d049192_P002	Maize	extracellular	23.97	39.6

Protein Annotations

EnsemblPlants:CDX74919	EnsemblPlantsGene:GSBRNA2T00116920001	GO:A0A078CFL2	PANTHER:PTHR15852	PANTHER:PTHR15852:SF20	ProteinID:CDX74919
ProteinID:CDX74919.1	SEG:seg	UniParc:UPI0004EF1BB5	MapMan:35.2	:	:

Description

BnaA05g06650D

Coordinates

chrLK031802:+:1472648..1475199

Molecular Weight (calculated)

45652.2 Da

IEP (calculated)

6.491

GRAVY (calculated)

-0.323

Length

413 amino acids

Sequence
(BLAST)

001: MEKPLLSDNK TKEPERWDSY QYLQRNISSA RNNVSFAGAG VTVEEVRSAS AVSDPPPLYP PVLTSPVSLP TPEAIGYPSA SGAGHELQRQ VLDEIEIREL
101: LIDHIGHRCC WGSRPARTWK IRAVEDCNVY VGTLDTFVEE REALTQTVPF NGGNFEHGSA PELWQIDLRS QFPTLFVPYK ETRVPVPHSE TVDKCTGCGG
201: RGEVVCPTCN ADGEPGFYKE NQVMKCSKCY GRGLIAHKDG SDSICGDCNG EGKLPCPNCQ SRGLIKCETC DGSGSLLTSS IAVVKWKTLS KRKVSATRGA
301: GSVPEEVFHR AEGVQLCNTQ AYQCTPAYFA DSYFLNKFSS EVISLRAEVP PTANVVCERH AISVVPVTRV TMEDRGKAFN FYIIGFGKEI YMKDYYPARF
401: CWGLCPCLEW LKV

Best Arabidopsis Sequence Match ( AT2G38000.1 )
(BLAST)

001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV

Arabidopsis Description

Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.