Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G139500.1 | Wheat | nucleus | 94.84 | 94.64 |
| TraesCS2A01G136800.1 | Wheat | nucleus | 85.59 | 93.43 |
| TraesCS2B01G160700.1 | Wheat | nucleus | 91.83 | 92.42 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 80.65 | 80.13 |
| OQU83401 | Sorghum | nucleus | 77.2 | 78.21 |
| HORVU2Hr1G024160.1 | Barley | cytosol | 69.68 | 71.52 |
| Zm00001d049192_P002 | Maize | extracellular | 35.7 | 66.4 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 59.35 | 63.74 |
| KRH49254 | Soybean | endoplasmic reticulum | 56.34 | 61.36 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 56.56 | 60.88 |
| Solyc09g011880.2.1 | Tomato | nucleus | 55.48 | 59.86 |
| PGSC0003DMT400052379 | Potato | cytosol | 55.27 | 59.35 |
| CDX91423 | Canola | cytosol | 51.4 | 57.59 |
| Bra005144.1-P | Field mustard | cytosol | 50.75 | 57.28 |
| CDX74919 | Canola | cytosol | 50.32 | 56.66 |
| AT2G38000.1 | Thale cress | cytosol | 50.54 | 56.09 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G024150.5 | EnsemblPlantsGene:HORVU2Hr1G024150 | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | SEG:seg | UniParc:UPI000B4859E0 |
| UniProt:A0A287HE74 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:73398305..73402831
Molecular Weight (calculated)
50684.9 Da
IEP (calculated)
6.967
GRAVY (calculated)
-0.340
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMEAKREAG EEEESRRPLL PPSPSPGSPS STEPAEHQQQ YQHLGRSSSS ALRGGGGGWG AEVSAAEVRS AASFSSSNYY PTAPNPHHDA VVYPPSIHSA
101: VLSPSPSSAA TPQHTHGSLA IVPQGPYGGD YQPSQGVARD VLDEVEIRHL LIEHVGHRCC WGSRPARTWK ITSIEDCNVY VGTLETFIEE RDTILKKEPY
201: DGGKIDGRDK GPVLGVWELD LRSEFPMLFV PEKEVMVKIP HSEVTEKCLD CEGRGEAPCP TCNAGQEHGF YKANQMTRCS VCHGRGLLAH QDGSDSVCGM
301: CNGQGMLPCI ACASRGLVTC QTCNGCGSLL AQSTAHVRWK TLTVRKVSAT AGAASVPDEV FHRAQGVQLC NIQAYQCTPA FFADSYPLNQ FSSEIVASRL
401: PIPPSARVIS ERHIISVVPV TRVTMSHRKR SFSFYVVGYG RDVFIRDYPS KFCWGLCRCF EWLGN
101: VLSPSPSSAA TPQHTHGSLA IVPQGPYGGD YQPSQGVARD VLDEVEIRHL LIEHVGHRCC WGSRPARTWK ITSIEDCNVY VGTLETFIEE RDTILKKEPY
201: DGGKIDGRDK GPVLGVWELD LRSEFPMLFV PEKEVMVKIP HSEVTEKCLD CEGRGEAPCP TCNAGQEHGF YKANQMTRCS VCHGRGLLAH QDGSDSVCGM
301: CNGQGMLPCI ACASRGLVTC QTCNGCGSLL AQSTAHVRWK TLTVRKVSAT AGAASVPDEV FHRAQGVQLC NIQAYQCTPA FFADSYPLNQ FSSEIVASRL
401: PIPPSARVIS ERHIISVVPV TRVTMSHRKR SFSFYVVGYG RDVFIRDYPS KFCWGLCRCF EWLGN
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.