Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052379 | Potato | cytosol | 97.22 | 96.77 |
| KRH49254 | Soybean | endoplasmic reticulum | 71.93 | 72.6 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 70.77 | 70.6 |
| CDX91423 | Canola | cytosol | 62.18 | 64.58 |
| AT2G38000.1 | Thale cress | cytosol | 62.65 | 64.44 |
| CDX74919 | Canola | cytosol | 61.02 | 63.68 |
| Bra005144.1-P | Field mustard | cytosol | 60.79 | 63.59 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 62.88 | 62.59 |
| TraesCS2A01G136800.1 | Wheat | nucleus | 57.54 | 58.22 |
| TraesCS2B01G160700.1 | Wheat | nucleus | 60.32 | 56.28 |
| TraesCS2D01G139500.1 | Wheat | nucleus | 60.56 | 56.01 |
| OQU83401 | Sorghum | nucleus | 59.16 | 55.56 |
| HORVU2Hr1G024150.5 | Barley | nucleus | 59.86 | 55.48 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 59.63 | 54.91 |
| TraesCS2D01G139400.1 | Wheat | nucleus | 57.77 | 54.49 |
| TraesCS2B01G160600.1 | Wheat | nucleus | 56.38 | 53.64 |
| TraesCS2A01G136700.1 | Wheat | nucleus | 55.22 | 52.42 |
| HORVU2Hr1G024160.1 | Barley | cytosol | 53.36 | 50.77 |
| Zm00001d049192_P002 | Maize | extracellular | 25.75 | 44.4 |
Protein Annotations
| EnsemblPlants:Solyc09g011880.2.1 | EnsemblPlantsGene:Solyc09g011880.2 | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | SEG:seg | UniParc:UPI000276B538 |
| UniProt:K4CRL4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:5155740..5160598
Molecular Weight (calculated)
47849.5 Da
IEP (calculated)
6.741
GRAVY (calculated)
-0.406
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQPLLIGKV ASETGQRGSE KWGSYEYVGR AGSVIPTTSL AGSEVSVDEI RSAASMSVPY SPSLHAPLIS SPQSQSQPQF YEQGIVYQGG YYGDASGTTG
101: DQRRQVLDEV EVRELLIDHV GHRCCWGSRP ARTWKIHAIE DCNVYVGTLE TFTEERDTVV EKELYSGGSI EGKDKGPETG IWELDLRSEF PVLFVPYKES
201: RLRIPHSETI EKCSGCDGRG NTVCPTCNTD QDPGFYKEGQ MTQCTTCYGR GLIAHKDGSD TICLNCKGNG KLPCVTCESR GLIKCQTCQG GGSLLTQKVA
301: VVRWRTHSTR KVNATSGAAS VPDDVFHRAK GVQLCNNQAY QCTPAYFADS YFLNKFSSEV IAERPSVPTT ARIICERHII SVVPVTRVTM TDRNRSFSFY
401: IIGNDREVYM KDYYPSRFCW GLCPCLEWLK L
101: DQRRQVLDEV EVRELLIDHV GHRCCWGSRP ARTWKIHAIE DCNVYVGTLE TFTEERDTVV EKELYSGGSI EGKDKGPETG IWELDLRSEF PVLFVPYKES
201: RLRIPHSETI EKCSGCDGRG NTVCPTCNTD QDPGFYKEGQ MTQCTTCYGR GLIAHKDGSD TICLNCKGNG KLPCVTCESR GLIKCQTCQG GGSLLTQKVA
301: VVRWRTHSTR KVNATSGAAS VPDDVFHRAK GVQLCNNQAY QCTPAYFADS YFLNKFSSEV IAERPSVPTT ARIICERHII SVVPVTRVTM TDRNRSFSFY
401: IIGNDREVYM KDYYPSRFCW GLCPCLEWLK L
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.