Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G136800.1 | Wheat | nucleus | 87.55 | 95.77 |
| TraesCS2B01G160700.1 | Wheat | nucleus | 94.85 | 95.67 |
| HORVU2Hr1G024150.5 | Barley | nucleus | 94.64 | 94.84 |
| TraesCS2D01G139400.1 | Wheat | nucleus | 80.9 | 82.49 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 81.55 | 81.2 |
| OQU83401 | Sorghum | nucleus | 78.33 | 79.52 |
| Zm00001d049192_P002 | Maize | extracellular | 36.27 | 67.6 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 59.23 | 63.74 |
| KRH49254 | Soybean | endoplasmic reticulum | 55.79 | 60.89 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 56.44 | 60.88 |
| Solyc09g011880.2.1 | Tomato | nucleus | 56.01 | 60.56 |
| PGSC0003DMT400052379 | Potato | cytosol | 55.36 | 59.58 |
| CDX91423 | Canola | cytosol | 51.29 | 57.59 |
| Bra005144.1-P | Field mustard | cytosol | 50.64 | 57.28 |
| CDX74919 | Canola | cytosol | 50.21 | 56.66 |
| AT2G38000.1 | Thale cress | cytosol | 50.64 | 56.32 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G139500.1 | EnsemblPlantsGene:TraesCS2D01G139500 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | SEG:seg |
| SUPFAM:SSF57938 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:82185579..82189966
Molecular Weight (calculated)
50619.7 Da
IEP (calculated)
7.196
GRAVY (calculated)
-0.335
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMGAEREAG EEEESRRPLL PSSPSPAAEH QQQYQHLGRS SSSALRGGGG GWGGGGAEVS AAEVRSAASF SSSSSNYYPS APSPHHDAVV YPPSIHSAVL
101: SPSPSSAATP QHAHAQGLAI VPQGPYGGDY QPSQSQGVRR DVLDEVEIRH LLIEHVGHRC CWGSRPARTW KITSIEDCNV YVGTLETFIE ERDTILKKEP
201: YDGGKIDGRD KGPVLGVWEL DLRSEFPMLF VPEKEVMVKI PHSEITEKCL DCEGRGEAPC PTCNAGQQHG FYKANQMTRC SVCHGRGLLA HQDGSDSVCG
301: MCNGQGMLPC IACASRGLVT CQTCNGCGSL LAQSTAHVRW KTLTARKVSA TTGAASVPDE VFHRAQGVQL CNIQAYQCTP AFFADSYPLN QFSSEIVASR
401: LPVPPSARVI SERHIISVVP VTRVTMSHRK RSFSFYVVGY GRDVFIRDYP SKFCWGLCRC FEWLGN
101: SPSPSSAATP QHAHAQGLAI VPQGPYGGDY QPSQSQGVRR DVLDEVEIRH LLIEHVGHRC CWGSRPARTW KITSIEDCNV YVGTLETFIE ERDTILKKEP
201: YDGGKIDGRD KGPVLGVWEL DLRSEFPMLF VPEKEVMVKI PHSEITEKCL DCEGRGEAPC PTCNAGQQHG FYKANQMTRC SVCHGRGLLA HQDGSDSVCG
301: MCNGQGMLPC IACASRGLVT CQTCNGCGSL LAQSTAHVRW KTLTARKVSA TTGAASVPDE VFHRAQGVQL CNIQAYQCTP AFFADSYPLN QFSSEIVASR
401: LPVPPSARVI SERHIISVVP VTRVTMSHRK RSFSFYVVGY GRDVFIRDYP SKFCWGLCRC FEWLGN
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.