Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G136800.1 | Wheat | nucleus | 89.39 | 96.95 |
| TraesCS2D01G139500.1 | Wheat | nucleus | 95.67 | 94.85 |
| HORVU2Hr1G024150.5 | Barley | nucleus | 92.42 | 91.83 |
| TraesCS2B01G160600.1 | Wheat | nucleus | 80.74 | 82.34 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 80.74 | 79.7 |
| OQU83401 | Sorghum | nucleus | 78.14 | 78.65 |
| Zm00001d049192_P002 | Maize | extracellular | 36.15 | 66.8 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 59.31 | 63.28 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 56.93 | 60.88 |
| KRH49254 | Soybean | endoplasmic reticulum | 56.06 | 60.66 |
| Solyc09g011880.2.1 | Tomato | nucleus | 56.28 | 60.32 |
| PGSC0003DMT400052379 | Potato | cytosol | 55.63 | 59.35 |
| CDX91423 | Canola | cytosol | 51.73 | 57.59 |
| Bra005144.1-P | Field mustard | cytosol | 51.3 | 57.52 |
| CDX74919 | Canola | cytosol | 50.87 | 56.9 |
| AT2G38000.1 | Thale cress | cytosol | 51.08 | 56.32 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G160700.1 | EnsemblPlantsGene:TraesCS2B01G160700 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | SEG:seg |
| SUPFAM:SSF57938 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:134089995..134094837
Molecular Weight (calculated)
50324.6 Da
IEP (calculated)
7.285
GRAVY (calculated)
-0.329
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMGAEREAG EEEESRRPLL PPSPSPAAEH QQQYQHLGRS SSSALRGSRG GWGGGGAAEV SAAEVKSAAS FSSSYYPSAP NPRDDAVVYP PSIHSAVLSP
101: SPSTAATPQH THAQGLAIVP QGPYGGDYQP SQGVTRDVLD EVEIRHLLIE HVGHRCCWGS RPARTWKITS IEDCNVYVGT LETFIEERDT ILKKEPYNGG
201: KIDGRDKGPV LGVWELDLRS EFPMLFVPEK EVMVKIPHSE ITEKCLDCEG RGEAPCPTCN AGQQHGFYKA NQMTRCSICH GRGLLAHQDG SDSVCGMCNG
301: QGMLPCIACA SRGLVTCQTC NGCGSLLAQS TAHVRWKTLT ARKVSATTGA ASVPDEVFHR AQGVQLCNIQ AYQCTPAFFA DSYPLNQFSS EIVASRLPVP
401: PSARVISERH IISVVPVTRV TMSHRKRSFS FYVVGYGRDV FIRDYPSKFC WGLCRCFEWL GN
101: SPSTAATPQH THAQGLAIVP QGPYGGDYQP SQGVTRDVLD EVEIRHLLIE HVGHRCCWGS RPARTWKITS IEDCNVYVGT LETFIEERDT ILKKEPYNGG
201: KIDGRDKGPV LGVWELDLRS EFPMLFVPEK EVMVKIPHSE ITEKCLDCEG RGEAPCPTCN AGQQHGFYKA NQMTRCSICH GRGLLAHQDG SDSVCGMCNG
301: QGMLPCIACA SRGLVTCQTC NGCGSLLAQS TAHVRWKTLT ARKVSATTGA ASVPDEVFHR AQGVQLCNIQ AYQCTPAFFA DSYPLNQFSS EIVASRLPVP
401: PSARVISERH IISVVPVTRV TMSHRKRSFS FYVVGYGRDV FIRDYPSKFC WGLCRCFEWL GN
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.