CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74919	Canola	cytosol	95.9	96.37
AT2G38000.1	Thale cress	cytosol	88.43	87.59
KRH49254	Soybean	endoplasmic reticulum	65.78	63.93
Solyc09g011880.2.1	Tomato	nucleus	64.58	62.18
VIT_08s0007g01660.t01	Wine grape	cytosol	64.58	62.04
PGSC0003DMT400052379	Potato	cytosol	64.1	61.43
GSMUA_Achr6P14970_001	Banana	nucleus	58.8	56.35
TraesCS2A01G136800.1	Wheat	nucleus	56.39	54.93
OQU83401	Sorghum	nucleus	57.83	52.29
TraesCS2B01G160700.1	Wheat	nucleus	57.59	51.73
HORVU2Hr1G024150.5	Barley	nucleus	57.59	51.4
TraesCS2D01G139500.1	Wheat	nucleus	57.59	51.29
Os05t0316200-01	Rice	cytosol, nucleus, plastid	57.59	51.07
TraesCS2A01G136700.1	Wheat	nucleus	53.73	49.12
TraesCS2D01G139400.1	Wheat	nucleus	53.98	49.02
TraesCS2B01G160600.1	Wheat	nucleus	53.25	48.79
HORVU2Hr1G024160.1	Barley	cytosol	50.6	46.36
Zm00001d049192_P002	Maize	extracellular	24.34	40.4

Protein Annotations

EnsemblPlants:CDX91423	EnsemblPlantsGene:GSBRNA2T00152735001	GO:A0A078DW17	PANTHER:PTHR15852	PANTHER:PTHR15852:SF20	ProteinID:CDX91423
ProteinID:CDX91423.1	SEG:seg	UniParc:UPI0004EE4781	MapMan:35.2	:	:

Description

BnaC04g07270D

Coordinates

chrLK031867:-:742513..744911

Molecular Weight (calculated)

45871.5 Da

IEP (calculated)

7.260

GRAVY (calculated)

-0.321

Length

415 amino acids

Sequence
(BLAST)

001: MDKPLLSDKT KESERWDSYQ YLQRNISSAR NNVSFAGAGV TVEEVRSASA VSDPPPLYPP VLTSPVSLPT PEAIGYPSAS GAGHELQRQV LDEIEIRELL
101: IDHIGHRCCW GSRPARTWKI RAVEDCNVYV GTLDTFIEER EALTQTVPFT GGSFNGKKHG SAPELWQLDL RSQFPTLFVP YKETRVPVPH SETVDKCTGC
201: TGRGEVVCPT CNADGEPGFY KENQVMKCSK CYGRGLIAHK DGSDSICGEC NGEGKLPCPN CQSRGLIKCE TCNGSGSLLT SSIAVVRWKT LSKRKVSATR
301: GAGSVPEEVF HRAEGVQLCN TQAYQCTPAY FADSYFLNKF SSEVISLRAE VPPTANVVCE RHAISVVPVT RVTMEDRGKA FNFYIIGFGK EIYMKDYYPA
401: RFCWGLCPCL EWLKV

Best Arabidopsis Sequence Match ( AT2G38000.1 )
(BLAST)

001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV

Arabidopsis Description

Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.