Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G160600.1 | Wheat | nucleus | 75.28 | 75.28 |
| TraesCS2D01G139400.1 | Wheat | nucleus | 74.83 | 74.18 |
| TraesCS2A01G136700.1 | Wheat | nucleus | 73.95 | 73.79 |
| HORVU2Hr1G024150.5 | Barley | nucleus | 71.52 | 69.68 |
| Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 66.23 | 64.1 |
| OQU83401 | Sorghum | nucleus | 63.36 | 62.53 |
| GSMUA_Achr6P14970_001 | Banana | nucleus | 53.2 | 55.66 |
| VIT_08s0007g01660.t01 | Wine grape | cytosol | 51.66 | 54.17 |
| Solyc09g011880.2.1 | Tomato | nucleus | 50.77 | 53.36 |
| KRH49254 | Soybean | endoplasmic reticulum | 50.11 | 53.16 |
| PGSC0003DMT400052379 | Potato | cytosol | 49.89 | 52.19 |
| Zm00001d049192_P002 | Maize | extracellular | 28.7 | 52.0 |
| CDX91423 | Canola | cytosol | 46.36 | 50.6 |
| Bra005144.1-P | Field mustard | cytosol | 45.7 | 50.24 |
| CDX74919 | Canola | cytosol | 45.25 | 49.64 |
| AT2G38000.1 | Thale cress | cytosol | 45.7 | 49.4 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G024160.1 | EnsemblPlantsGene:HORVU2Hr1G024160 | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | SEG:seg | UniParc:UPI000B4839DF |
| UniProt:A0A287HDU7 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:73406114..73410145
Molecular Weight (calculated)
49724.2 Da
IEP (calculated)
7.060
GRAVY (calculated)
-0.281
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIAAANPIA RIQSESAAPM TTEAGEEEPR RPLLPPSPSP AAEHQHLGLS GGGGGWADLS AAEVKTAVSF SPSANCCPPS PNPHHDAVYP PPSTAAIPPY
101: THGVAVAPQG PYPYGGYYHP SQDVQRDVLD EVEARRLLIE HVGHRCCWGS QPARTWKITS IKDCSDVYVG TLETFIEERD VVLEKEPYHG EEVDGRDKGP
201: VPDVWELDLR SEFPMLFVPE KEVMVKIPHS QVTEKCSNCQ GRREVPCPTC NPGRQPGFYM ADQMIKCSLC DGRGLRTQQD GSDSVCWRCN GQGMLRCTAC
301: GSRGLVVCQK CNGCGSLLAQ SIARVRWRTL TAREVSATAG SASVPDKVFH RAQGVQLCSI EAYQCIPAFF ADSYPLSLLS SEVVASRLPV PPSARVILER
401: HIISVVPVTR VTMSHRKRSF SFYVVGYGRD VFVRDYPSRF CWGLCRCFEW LGN
101: THGVAVAPQG PYPYGGYYHP SQDVQRDVLD EVEARRLLIE HVGHRCCWGS QPARTWKITS IKDCSDVYVG TLETFIEERD VVLEKEPYHG EEVDGRDKGP
201: VPDVWELDLR SEFPMLFVPE KEVMVKIPHS QVTEKCSNCQ GRREVPCPTC NPGRQPGFYM ADQMIKCSLC DGRGLRTQQD GSDSVCWRCN GQGMLRCTAC
301: GSRGLVVCQK CNGCGSLLAQ SIARVRWRTL TAREVSATAG SASVPDKVFH RAQGVQLCSI EAYQCIPAFF ADSYPLSLLS SEVVASRLPV PPSARVILER
401: HIISVVPVTR VTMSHRKRSF SFYVVGYGRD VFVRDYPSRF CWGLCRCFEW LGN
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.