Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2B01G160600.1 | Wheat | nucleus | 91.41 | 91.61 |
TraesCS2D01G139400.1 | Wheat | nucleus | 91.63 | 91.03 |
TraesCS2A01G136800.1 | Wheat | nucleus | 73.79 | 78.64 |
HORVU2Hr1G024160.1 | Barley | cytosol | 73.79 | 73.95 |
Os05t0316200-01 | Rice | cytosol, nucleus, plastid | 72.03 | 69.87 |
OQU83401 | Sorghum | nucleus | 68.72 | 67.97 |
Zm00001d049192_P002 | Maize | extracellular | 33.04 | 60.0 |
GSMUA_Achr6P14970_001 | Banana | nucleus | 55.29 | 57.97 |
VIT_08s0007g01660.t01 | Wine grape | cytosol | 54.19 | 56.94 |
KRH49254 | Soybean | endoplasmic reticulum | 52.42 | 55.74 |
Solyc09g011880.2.1 | Tomato | nucleus | 52.42 | 55.22 |
PGSC0003DMT400052379 | Potato | cytosol | 51.76 | 54.27 |
CDX91423 | Canola | cytosol | 49.12 | 53.73 |
Bra005144.1-P | Field mustard | cytosol | 48.46 | 53.4 |
CDX74919 | Canola | cytosol | 48.02 | 52.78 |
AT2G38000.1 | Thale cress | cytosol | 48.24 | 52.27 |
Protein Annotations
EnsemblPlants:TraesCS2A01G136700.1 | EnsemblPlantsGene:TraesCS2A01G136700 | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF20 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr2A:-:82345445..82349457
Molecular Weight (calculated)
49946.0 Da
IEP (calculated)
6.546
GRAVY (calculated)
-0.377
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMEAERGAG EEEEEPRRPL LSPSSPAAEH QHVGRSSSSA LREGGGGWEE VGAAEVKSAA SFSSPNYYPL APNPHHDAVY PPSIHSAVLP PSPSTAATPP
101: HTHGLAIGSQ GPYPYGGDYQ PAQGVRRGVL DEVEVRQMLI EHVGHRCCWG SRPARTWKIT SIKDCCDVYV GTLETFIEQR DTIFEREPYH GGEVDGRDKG
201: PVLGVWELDL RSEFPPLFVP EKEVRVKIPH SQVTEKCSAC EGRGKVPCPT CNPGRQYGFY MANQMTQCSV CDGRGSLAQQ DESDSVCWMC NGQGVLPCRE
301: CGSRGLVTCR TCNGCGSLLT QSIARVRWET LTARKVSATA ETGSVPDEVF HRAQGMQLCN IQAYQCTPAF FADSYPLNQL SSEVVANRLP VPPSTIVISE
401: RHIISVVPVT HVTMSHRKPS FIFYVVGYGR DVFVQNYPSR FCWGLCRCFE WFGN
101: HTHGLAIGSQ GPYPYGGDYQ PAQGVRRGVL DEVEVRQMLI EHVGHRCCWG SRPARTWKIT SIKDCCDVYV GTLETFIEQR DTIFEREPYH GGEVDGRDKG
201: PVLGVWELDL RSEFPPLFVP EKEVRVKIPH SQVTEKCSAC EGRGKVPCPT CNPGRQYGFY MANQMTQCSV CDGRGSLAQQ DESDSVCWMC NGQGVLPCRE
301: CGSRGLVTCR TCNGCGSLLT QSIARVRWET LTARKVSATA ETGSVPDEVF HRAQGMQLCN IQAYQCTPAF FADSYPLNQL SSEVVANRLP VPPSTIVISE
401: RHIISVVPVT HVTMSHRKPS FIFYVVGYGR DVFVQNYPSR FCWGLCRCFE WFGN
001: MDKPLLSGSE KTNESERLDS YQYLQRNSSS ARNPSFAGAG VVTVEEIRTA SAVSSDPPSL YPPVIKTPVS LPIPQAIGYP SASGAGHELQ QRQFLDEIEI
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
101: RELLIDHIGH RCCWGSRPAR TWKIHAVEDC NVYVGTLDTF IEEREALTQT VPFTGGEFNG KKHGSEPGLW ELDLRPQFPT LFVPYKETQV LVPNSETVEK
201: CTGCTGRGDV VCPTCNADGE PGFYKENQMM KCSTCYGRGL VAHKDGSDTI CTNCNGKGKL PCPTCQSRGL IKCQTCDSTG SLLTSSIAVV KWKTLSKRKV
301: SATRGAGSVP EEVFDRAEGV QLCNTQAYQC TPAYFADSYF LNRFSSEVIS LRAEVPPTAN VVCERHTISV VPVTRVTMED RGKAFSFYII GFGKEIYLKD
401: YYPARFCWGL CPCLEWLKV
Arabidopsis Description
Chaperone protein dnaJ-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SH87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.