Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001911.1-P | Field mustard | cytosol | 80.77 | 100.0 |
| CDX90258 | Canola | extracellular | 80.0 | 98.11 |
| AT3G23390.1 | Thale cress | cytosol | 77.69 | 96.19 |
| CDX92983 | Canola | cytosol | 80.0 | 95.41 |
| Solyc03g112850.2.1 | Tomato | cytosol | 76.92 | 95.24 |
| Solyc06g071530.2.1 | Tomato | nucleus | 76.92 | 95.24 |
| PGSC0003DMT400069671 | Potato | cytosol | 76.92 | 95.24 |
| PGSC0003DMT400046603 | Potato | cytosol | 76.92 | 95.24 |
| EER90549 | Sorghum | cytosol | 76.15 | 94.29 |
| EER96597 | Sorghum | cytosol | 76.15 | 94.29 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 76.15 | 94.29 |
| Zm00001d006510_P001 | Maize | plasma membrane | 76.15 | 94.29 |
| Zm00001d021652_P001 | Maize | cytosol | 76.15 | 94.29 |
| Os07t0523300-01 | Rice | cytosol | 68.46 | 93.68 |
| Os07t0523500-02 | Rice | cytosol | 68.46 | 93.68 |
| Os07t0523700-02 | Rice | cytosol | 68.46 | 93.68 |
| Os07t0523100-00 | Rice | plastid | 75.38 | 93.33 |
| Os07t0523150-00 | Rice | cytosol | 75.38 | 93.33 |
| Os07t0450000-01 | Rice | cytosol | 75.38 | 93.33 |
| TraesCS2D01G226100.1 | Wheat | cytosol | 75.38 | 93.33 |
| TraesCS5A01G320100.1 | Wheat | cytosol | 75.38 | 93.33 |
| TraesCS5A01G417600.1 | Wheat | cytosol | 75.38 | 93.33 |
| TraesCS5B01G320300.1 | Wheat | cytosol | 75.38 | 93.33 |
| TraesCS5D01G425600.1 | Wheat | cytosol | 75.38 | 93.33 |
| TraesCS7A01G454700.1 | Wheat | cytosol | 75.38 | 93.33 |
| TraesCS7A01G454800.1 | Wheat | cytosol | 75.38 | 93.33 |
| TraesCS7D01G443900.1 | Wheat | cytosol | 75.38 | 93.33 |
| KRH58331 | Soybean | cytosol | 75.38 | 93.33 |
| KRH43933 | Soybean | cytosol | 75.38 | 93.33 |
| KRH42207 | Soybean | cytosol | 75.38 | 93.33 |
| KRH10493 | Soybean | nucleus | 75.38 | 93.33 |
| CDY12759 | Canola | cytosol | 86.15 | 88.19 |
| CDY49411 | Canola | cytosol | 85.38 | 87.4 |
| GSMUA_Achr9P24920_001 | Banana | cytosol | 73.08 | 84.07 |
| CDX77519 | Canola | cytosol | 84.62 | 80.88 |
| OQU90027 | Sorghum | cytosol | 60.0 | 79.59 |
| CDX94859 | Canola | cytosol | 83.08 | 79.41 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 75.38 | 79.03 |
| CDY18124 | Canola | cytosol | 83.08 | 78.83 |
| GSMUA_Achr6P29350_001 | Banana | extracellular | 74.62 | 78.23 |
| Solyc03g123940.1.1 | Tomato | cytosol | 52.31 | 74.73 |
| TraesCS5B01G419800.1 | Wheat | cytosol | 74.62 | 74.05 |
| GSMUA_Achr6P00480_001 | Banana | endoplasmic reticulum, extracellular | 73.85 | 73.28 |
| CDY09010 | Canola | cytosol, mitochondrion | 85.38 | 72.55 |
| CDX85095 | Canola | cytosol, plastid | 83.08 | 67.92 |
| PGSC0003DMT400050885 | Potato | cytosol | 79.23 | 66.88 |
| Zm00001d019562_P003 | Maize | cytosol | 75.38 | 64.47 |
| TraesCS2B01G246000.1 | Wheat | golgi | 76.92 | 63.69 |
| HORVU5Hr1G081590.1 | Barley | cytosol, plastid | 76.92 | 61.73 |
| HORVU5Hr1G101600.1 | Barley | cytosol, nucleus, plastid | 77.69 | 61.59 |
| HORVU7Hr1G104300.1 | Barley | nucleus | 77.69 | 58.72 |
| GSMUA_Achr9P11710_001 | Banana | cytosol | 75.38 | 56.0 |
| HORVU2Hr1G045920.1 | Barley | cytosol, plastid | 76.92 | 55.25 |
| KXG25018 | Sorghum | mitochondrion | 30.0 | 49.37 |
| Zm00001d028202_P001 | Maize | cytosol | 35.38 | 46.46 |
| OQU83445 | Sorghum | mitochondrion | 26.15 | 41.98 |
| TraesCS5D01G326000.2 | Wheat | cytosol, nucleus | 64.62 | 39.62 |
| KXG28543 | Sorghum | mitochondrion | 31.54 | 37.61 |
| PGSC0003DMT400021706 | Potato | nucleus | 73.85 | 33.45 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 77.69 | 28.69 |
Protein Annotations
| MapMan:17.1.2.1.38 | Gene3D:3.10.450.80 | GO:A0A078FGE7 | UniProt:A0A078FGE7 | EnsemblPlants:CDY12064 | ProteinID:CDY12064 |
| ProteinID:CDY12064.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00061020001 | PFAM:PD002841 |
| PFAM:PF00935 | ScanProsite:PS01172 | PANTHER:PTHR10369 | InterPro:Ribosomal_L44e | InterPro:Ribosomal_zn-bd | SUPFAM:SSF57829 |
| UniParc:UPI0004EE3D4E | SEG:seg | : | : | : | : |
Description
BnaC03g59800DBnaC03g59800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGE7]
Coordinates
chrLK032017:+:211735..213513
Molecular Weight (calculated)
14934.4 Da
IEP (calculated)
10.890
GRAVY (calculated)
-0.993
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVKLFVSCI NKTDDAGTEL HRIAKMVNIP KTKKTYCKNK ECKKHTLHKV TQYKKGKDSL AAQGKRRYDR KQSGYGGQTK PVFHKKAKTT KKIVLRLQCQ
101: TCKHFSQHSI KRCKHFEIGG DKKGKGTSLF
101: TCKHFSQHSI KRCKHFEIGG DKKGKGTSLF
001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF
101: GTSLF
Arabidopsis Description
Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.