Factsheet for TraesCS2D01G226100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G443900.1	Wheat	cytosol	100.0	100.0
TraesCS5D01G425600.1	Wheat	cytosol	100.0	100.0
Zm00001d021652_P001	Maize	cytosol	99.05	99.05
Zm00001d006510_P001	Maize	plasma membrane	99.05	99.05
EER96597	Sorghum	cytosol	99.05	99.05
Os07t0450000-01	Rice	cytosol	97.14	97.14
Os07t0523150-00	Rice	cytosol	97.14	97.14
Os07t0523100-00	Rice	plastid	97.14	97.14
Os07t0523300-01	Rice	cytosol	87.62	96.84
Os07t0523500-02	Rice	cytosol	87.62	96.84
Os07t0523700-02	Rice	cytosol	87.62	96.84
Solyc06g071530.2.1	Tomato	nucleus	94.29	94.29
PGSC0003DMT400046603	Potato	cytosol	93.33	93.33
PGSC0003DMT400069671	Potato	cytosol	93.33	93.33
Solyc03g112850.2.1	Tomato	cytosol	93.33	93.33
KRH10493	Soybean	nucleus	92.38	92.38
KRH42207	Soybean	cytosol	92.38	92.38
KRH43933	Soybean	cytosol	92.38	92.38
KRH58331	Soybean	cytosol	92.38	92.38
VIT_13s0064g00880.t01	Wine grape	cytosol	92.38	92.38
CDX90258	Canola	extracellular	92.38	91.51
CDX92983	Canola	cytosol	92.38	88.99
GSMUA_Achr9P24920_001	Banana	cytosol	93.33	86.73
GSMUA_Achr6P29350_001	Banana	extracellular	95.24	80.65
VIT_01s0011g02090.t01	Wine grape	cytosol	91.43	77.42
Bra023728.1-P	Field mustard	cytosol	58.1	77.22
CDY12759	Canola	cytosol	93.33	77.17
CDY49411	Canola	cytosol	93.33	77.17
GSMUA_Achr6P00480_001	Banana	endoplasmic reticulum, extracellular	94.29	75.57
CDY12064	Canola	cytosol	93.33	75.38
Solyc03g123940.1.1	Tomato	cytosol	62.86	72.53
CDX77519	Canola	cytosol	93.33	72.06
CDX94859	Canola	cytosol	93.33	72.06
CDY18124	Canola	cytosol	93.33	71.53
TraesCS2B01G246000.1	Wheat	golgi	100.0	66.88
CDY09010	Canola	cytosol, mitochondrion	93.33	64.05
PGSC0003DMT400050885	Potato	cytosol	93.33	63.64
CDX85095	Canola	cytosol, plastid	93.33	61.64
HORVU2Hr1G045920.1	Barley	cytosol, plastid	100.0	58.01
GSMUA_Achr9P11710_001	Banana	cytosol	95.24	57.14
AT4G14320.2	Thale cress	cytosol	80.95	55.19
TraesCS5D01G326000.2	Wheat	cytosol, nucleus	86.67	42.92
PGSC0003DMT400021706	Potato	nucleus	85.71	31.36
VIT_01s0011g02080.t01	Wine grape	nucleus, plastid	91.43	27.27

Protein Annotations

MapMan:17.1.2.1.38	Gene3D:3.10.450.80	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	PFAM:PD002841	PFAM:PF00935
ScanProsite:PS01172	PANTHER:PTHR10369	InterPro:Ribosomal_L44e	InterPro:Ribosomal_zn-bd	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS2D01G226100
EnsemblPlants:TraesCS2D01G226100.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:194191261..194192792

Molecular Weight (calculated)

12103.9 Da

IEP (calculated)

10.967

GRAVY (calculated)

-1.247

Length

105 amino acids

Sequence
(BLAST)

001: MVNVPKTKKT YCKNKECKKH TLHKVTQYKK GKDSLSAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL KLQCQSCKHY SQRAIKRCKH FEIGGDKKGK
101: GTSLF

Best Arabidopsis Sequence Match ( AT4G14320.1 )
(BLAST)

001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF

Arabidopsis Description

Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.