CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001911.1-P	Field mustard	cytosol	76.64	100.0
CDX90258	Canola	extracellular	75.91	98.11
AT3G23390.1	Thale cress	cytosol	73.72	96.19
CDX92983	Canola	cytosol	75.91	95.41
Solyc03g112850.2.1	Tomato	cytosol	72.99	95.24
Solyc06g071530.2.1	Tomato	nucleus	72.99	95.24
PGSC0003DMT400069671	Potato	cytosol	72.99	95.24
PGSC0003DMT400046603	Potato	cytosol	72.99	95.24
EER90549	Sorghum	cytosol	72.26	94.29
EER96597	Sorghum	cytosol	72.26	94.29
VIT_13s0064g00880.t01	Wine grape	cytosol	72.26	94.29
Zm00001d006510_P001	Maize	plasma membrane	72.26	94.29
Zm00001d021652_P001	Maize	cytosol	72.26	94.29
Os07t0523300-01	Rice	cytosol	64.96	93.68
Os07t0523500-02	Rice	cytosol	64.96	93.68
Os07t0523700-02	Rice	cytosol	64.96	93.68
Os07t0523100-00	Rice	plastid	71.53	93.33
Os07t0523150-00	Rice	cytosol	71.53	93.33
Os07t0450000-01	Rice	cytosol	71.53	93.33
TraesCS2D01G226100.1	Wheat	cytosol	71.53	93.33
TraesCS5A01G320100.1	Wheat	cytosol	71.53	93.33
TraesCS5A01G417600.1	Wheat	cytosol	71.53	93.33
TraesCS5B01G320300.1	Wheat	cytosol	71.53	93.33
TraesCS5D01G425600.1	Wheat	cytosol	71.53	93.33
TraesCS7A01G454700.1	Wheat	cytosol	71.53	93.33
TraesCS7A01G454800.1	Wheat	cytosol	71.53	93.33
TraesCS7D01G443900.1	Wheat	cytosol	71.53	93.33
KRH58331	Soybean	cytosol	71.53	93.33
KRH43933	Soybean	cytosol	71.53	93.33
KRH42207	Soybean	cytosol	71.53	93.33
KRH10493	Soybean	nucleus	71.53	93.33
CDY12759	Canola	cytosol	79.56	85.83
CDY49411	Canola	cytosol	79.56	85.83
GSMUA_Achr9P24920_001	Banana	cytosol	69.34	84.07
CDY12064	Canola	cytosol	78.83	83.08
CDX77519	Canola	cytosol	79.56	80.15
CDX94859	Canola	cytosol	79.56	80.15
VIT_01s0011g02090.t01	Wine grape	cytosol	72.26	79.84
OQU90027	Sorghum	cytosol	56.93	79.59
GSMUA_Achr6P29350_001	Banana	extracellular	70.8	78.23
CDY09010	Canola	cytosol, mitochondrion	84.67	75.82
Solyc03g123940.1.1	Tomato	cytosol	49.63	74.73
TraesCS5B01G419800.1	Wheat	cytosol	70.8	74.05
GSMUA_Achr6P00480_001	Banana	endoplasmic reticulum, extracellular	69.34	72.52
CDX85095	Canola	cytosol, plastid	78.1	67.3
TraesCS2B01G246000.1	Wheat	golgi	74.45	64.97
PGSC0003DMT400050885	Potato	cytosol	72.99	64.94
Zm00001d019562_P003	Maize	cytosol	70.8	63.82
HORVU5Hr1G081590.1	Barley	cytosol, plastid	73.72	62.35
HORVU5Hr1G101600.1	Barley	cytosol, nucleus, plastid	73.72	61.59
HORVU7Hr1G104300.1	Barley	nucleus	73.72	58.72
GSMUA_Achr9P11710_001	Banana	cytosol	74.45	58.29
HORVU2Hr1G045920.1	Barley	cytosol, plastid	73.72	55.8
KXG25018	Sorghum	mitochondrion	27.01	46.84
Zm00001d028202_P001	Maize	cytosol	33.58	46.46
OQU83445	Sorghum	mitochondrion	24.09	40.74
TraesCS5D01G326000.2	Wheat	cytosol, nucleus	61.31	39.62
KXG28543	Sorghum	mitochondrion	29.2	36.7
PGSC0003DMT400021706	Potato	nucleus	70.8	33.8
VIT_01s0011g02080.t01	Wine grape	nucleus, plastid	72.26	28.12

Protein Annotations

MapMan:17.1.2.1.38	Gene3D:3.10.450.80	GO:A0A078FYC8	UniProt:A0A078FYC8	EnsemblPlants:CDY18124	ProteinID:CDY18124
ProteinID:CDY18124.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	EnsemblPlantsGene:GSBRNA2T00002640001	PFAM:PD002841
PFAM:PF00935	ScanProsite:PS01172	PANTHER:PTHR10369	InterPro:Ribosomal_L44e	InterPro:Ribosomal_zn-bd	SUPFAM:SSF57829
UniParc:UPI0004EE076A	SEG:seg	:	:	:	:

Description

BnaA01g23850DBnaA01g23850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYC8]

Coordinates

chrLK032082:-:694119..699148

Molecular Weight (calculated)

15952.5 Da

IEP (calculated)

11.238

GRAVY (calculated)

-1.309

Length

137 amino acids

Sequence
(BLAST)

001: MSSNKRHQPS TYRSRTTAHN LHPREREIRV AKMVNIPKTK KTYCKNKECK KHTLHKVTQY KKGKDSLAAQ GKRRYDRKQS GYGGQTKPVF HKKAKTTKKI
101: VLRLQCQTCK HFSQHSIKRC KHFEIGGDKK GKGTSLF

Best Arabidopsis Sequence Match ( AT4G14320.1 )
(BLAST)

001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF

Arabidopsis Description

Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.