Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU83445 | Sorghum | mitochondrion | 71.56 | 96.3 |
| KXG25018 | Sorghum | mitochondrion | 58.72 | 81.01 |
| CDX90258 | Canola | extracellular | 36.7 | 37.74 |
| OQU90027 | Sorghum | cytosol | 33.03 | 36.73 |
| CDX92983 | Canola | cytosol | 36.7 | 36.7 |
| EER96597 | Sorghum | cytosol | 34.86 | 36.19 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 33.95 | 35.24 |
| Solyc06g071530.2.1 | Tomato | nucleus | 33.95 | 35.24 |
| Solyc03g112850.2.1 | Tomato | cytosol | 33.95 | 35.24 |
| PGSC0003DMT400069671 | Potato | cytosol | 33.95 | 35.24 |
| PGSC0003DMT400046603 | Potato | cytosol | 33.95 | 35.24 |
| EER90549 | Sorghum | cytosol | 33.95 | 35.24 |
| KRH43933 | Soybean | cytosol | 33.03 | 34.29 |
| KRH58331 | Soybean | cytosol | 33.03 | 34.29 |
| KRH42207 | Soybean | cytosol | 33.03 | 34.29 |
| KRH10493 | Soybean | nucleus | 33.03 | 34.29 |
| Solyc03g123940.1.1 | Tomato | cytosol | 26.61 | 31.87 |
| CDY12064 | Canola | cytosol | 37.61 | 31.54 |
| CDY49411 | Canola | cytosol | 36.7 | 31.5 |
| CDY12759 | Canola | cytosol | 36.7 | 31.5 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 35.78 | 31.45 |
| CDX94859 | Canola | cytosol | 38.53 | 30.88 |
| CDX77519 | Canola | cytosol | 37.61 | 30.15 |
| CDY18124 | Canola | cytosol | 36.7 | 29.2 |
| CDX85095 | Canola | cytosol, plastid | 40.37 | 27.67 |
| CDY09010 | Canola | cytosol, mitochondrion | 38.53 | 27.45 |
| PGSC0003DMT400050885 | Potato | cytosol | 38.53 | 27.27 |
| AT4G14320.2 | Thale cress | cytosol | 34.86 | 24.68 |
| PGSC0003DMT400021706 | Potato | nucleus | 33.03 | 12.54 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 40.37 | 12.5 |
Protein Annotations
| Gene3D:3.10.450.80 | MapMan:35.2 | UniProt:A0A1B6PSA4 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlants:KXG28543 |
| ProteinID:KXG28543 | ProteinID:KXG28543.1 | PFAM:PD002841 | PANTHER:PTHR10369 | PANTHER:PTHR10369:SF9 | InterPro:Ribosomal_L44e |
| InterPro:Ribosomal_zn-bd | EnsemblPlantsGene:SORBI_3005G134800 | SUPFAM:SSF57829 | UniParc:UPI00081AD1DF | : | : |
Description
hypothetical protein
Coordinates
chr5:+:58208622..58210741
Molecular Weight (calculated)
12386.0 Da
IEP (calculated)
10.389
GRAVY (calculated)
-0.525
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVVALRPR MRRGDAFTAL EEAVSAARGR TPTPSSTKAK DLSVNIPKTK KTYCKNNECW KHTLHKVTQC KKGDDSLSAQ AWKQLAYIEL RGKEVARRWI
101: LYVITYCEV
101: LYVITYCEV
001: MAMSFSGAVL TGMASSFHSG AKQSSFGAVR VGQKTQFVVV SQRKKSLIYA AKGDGNILDD LNEATKKASD FVTDKTKEAL ADGEKAKDYV VEKNSETADT
101: LGKEAEKAAA YVEEKGKEAA NKAAEFAEGK AGEAKDATK
101: LGKEAEKAAA YVEEKGKEAA NKAAEFAEGK AGEAKDATK
Arabidopsis Description
COR15AProtein COLD-REGULATED 15A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42512]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.