CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021652_P001	Maize	cytosol	100.0	100.0
Zm00001d006510_P001	Maize	plasma membrane	100.0	100.0
TraesCS7D01G443900.1	Wheat	cytosol	99.05	99.05
TraesCS7A01G454800.1	Wheat	cytosol	99.05	99.05
TraesCS7A01G454700.1	Wheat	cytosol	99.05	99.05
TraesCS5D01G425600.1	Wheat	cytosol	99.05	99.05
TraesCS5B01G320300.1	Wheat	cytosol	99.05	99.05
TraesCS5A01G417600.1	Wheat	cytosol	99.05	99.05
TraesCS5A01G320100.1	Wheat	cytosol	99.05	99.05
TraesCS2D01G226100.1	Wheat	cytosol	99.05	99.05
Os07t0450000-01	Rice	cytosol	98.1	98.1
Os07t0523150-00	Rice	cytosol	98.1	98.1
Os07t0523100-00	Rice	plastid	98.1	98.1
Os07t0523700-02	Rice	cytosol	88.57	97.89
Os07t0523500-02	Rice	cytosol	88.57	97.89
Os07t0523300-01	Rice	cytosol	88.57	97.89
EER90549	Sorghum	cytosol	97.14	97.14
Solyc06g071530.2.1	Tomato	nucleus	95.24	95.24
Solyc03g112850.2.1	Tomato	cytosol	94.29	94.29
PGSC0003DMT400069671	Potato	cytosol	94.29	94.29
PGSC0003DMT400046603	Potato	cytosol	94.29	94.29
KRH10493	Soybean	nucleus	93.33	93.33
KRH42207	Soybean	cytosol	93.33	93.33
KRH43933	Soybean	cytosol	93.33	93.33
KRH58331	Soybean	cytosol	93.33	93.33
VIT_13s0064g00880.t01	Wine grape	cytosol	93.33	93.33
CDX90258	Canola	extracellular	93.33	92.45
CDX92983	Canola	cytosol	93.33	89.91
GSMUA_Achr9P24920_001	Banana	cytosol	94.29	87.61
OQU90027	Sorghum	cytosol	80.0	85.71
GSMUA_Achr6P29350_001	Banana	extracellular	96.19	81.45
TraesCS5B01G419800.1	Wheat	cytosol	98.1	78.63
Bra023728.1-P	Field mustard	cytosol	59.05	78.48
VIT_01s0011g02090.t01	Wine grape	cytosol	92.38	78.23
CDY12759	Canola	cytosol	94.29	77.95
CDY49411	Canola	cytosol	94.29	77.95
GSMUA_Achr6P00480_001	Banana	endoplasmic reticulum, extracellular	95.24	76.34
CDY12064	Canola	cytosol	94.29	76.15
Solyc03g123940.1.1	Tomato	cytosol	63.81	73.63
CDX77519	Canola	cytosol	94.29	72.79
CDX94859	Canola	cytosol	94.29	72.79
CDY18124	Canola	cytosol	94.29	72.26
TraesCS2B01G246000.1	Wheat	golgi	99.05	66.24
CDY09010	Canola	cytosol, mitochondrion	94.29	64.71
PGSC0003DMT400050885	Potato	cytosol	94.29	64.29
HORVU5Hr1G081590.1	Barley	cytosol, plastid	99.05	64.2
HORVU5Hr1G101600.1	Barley	cytosol, nucleus, plastid	99.05	63.41
CDX85095	Canola	cytosol, plastid	94.29	62.26
HORVU7Hr1G104300.1	Barley	nucleus	99.05	60.47
GSMUA_Achr9P11710_001	Banana	cytosol	96.19	57.71
HORVU2Hr1G045920.1	Barley	cytosol, plastid	99.05	57.46
KXG25018	Sorghum	mitochondrion	34.29	45.57
OQU83445	Sorghum	mitochondrion	30.48	39.51
KXG28543	Sorghum	mitochondrion	36.19	34.86
PGSC0003DMT400021706	Potato	nucleus	86.67	31.71
VIT_01s0011g02080.t01	Wine grape	nucleus, plastid	92.38	27.56

Protein Annotations

MapMan:17.1.2.1.38	Gene3D:3.10.450.80	EntrezGene:8055538	UniProt:C5XAH7	EnsemblPlants:EER96597	ProteinID:EER96597
ProteinID:EER96597.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0030529
PFAM:PD002841	PFAM:PF00935	ScanProsite:PS01172	PANTHER:PTHR10369	InterPro:Ribosomal_L44e	InterPro:Ribosomal_zn-bd
EnsemblPlantsGene:SORBI_3002G175100	SUPFAM:SSF57829	unigene:Sbi.18331	UniParc:UPI000182AE11	RefSeq:XP_002460076.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:55379420..55381323

Molecular Weight (calculated)

12084.9 Da

IEP (calculated)

10.907

GRAVY (calculated)

-1.234

Length

105 amino acids

Sequence
(BLAST)

001: MVNVPKTKKT YCKNKECKKH TLHKVTQYKK GKDSLSAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL KLQCQSCKHY SQHAIKRCKH FEIGGDKKGK
101: GTSLF

Best Arabidopsis Sequence Match ( AT4G14320.1 )
(BLAST)

001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF

Arabidopsis Description

Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.