Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G443900.1 | Wheat | cytosol | 61.05 | 100.0 |
| TraesCS7A01G454800.1 | Wheat | cytosol | 61.05 | 100.0 |
| TraesCS7A01G454700.1 | Wheat | cytosol | 61.05 | 100.0 |
| Zm00001d021652_P001 | Maize | cytosol | 60.47 | 99.05 |
| Zm00001d006510_P001 | Maize | plasma membrane | 60.47 | 99.05 |
| EER96597 | Sorghum | cytosol | 60.47 | 99.05 |
| Os07t0450000-01 | Rice | cytosol | 59.3 | 97.14 |
| Os07t0523100-00 | Rice | plastid | 59.3 | 97.14 |
| Os07t0523150-00 | Rice | cytosol | 59.3 | 97.14 |
| Os07t0523300-01 | Rice | cytosol | 53.49 | 96.84 |
| Os07t0523700-02 | Rice | cytosol | 53.49 | 96.84 |
| Os07t0523500-02 | Rice | cytosol | 53.49 | 96.84 |
| Solyc06g071530.2.1 | Tomato | nucleus | 57.56 | 94.29 |
| PGSC0003DMT400046603 | Potato | cytosol | 56.98 | 93.33 |
| PGSC0003DMT400069671 | Potato | cytosol | 56.98 | 93.33 |
| Solyc03g112850.2.1 | Tomato | cytosol | 56.98 | 93.33 |
| KRH43933 | Soybean | cytosol | 56.4 | 92.38 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 56.4 | 92.38 |
| KRH58331 | Soybean | cytosol | 56.4 | 92.38 |
| KRH42207 | Soybean | cytosol | 56.4 | 92.38 |
| KRH10493 | Soybean | nucleus | 56.4 | 92.38 |
| CDX90258 | Canola | extracellular | 56.4 | 91.51 |
| CDX92983 | Canola | cytosol | 56.4 | 88.99 |
| GSMUA_Achr9P24920_001 | Banana | cytosol | 57.56 | 87.61 |
| GSMUA_Achr6P29350_001 | Banana | extracellular | 59.3 | 82.26 |
| CDY49411 | Canola | cytosol | 58.72 | 79.53 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 56.98 | 79.03 |
| CDY12759 | Canola | cytosol | 58.14 | 78.74 |
| CDY12064 | Canola | cytosol | 58.72 | 77.69 |
| Bra023728.1-P | Field mustard | cytosol | 35.47 | 77.22 |
| CDX77519 | Canola | cytosol | 59.88 | 75.74 |
| GSMUA_Achr6P00480_001 | Banana | endoplasmic reticulum, extracellular | 57.56 | 75.57 |
| CDY18124 | Canola | cytosol | 58.72 | 73.72 |
| CDX94859 | Canola | cytosol | 58.14 | 73.53 |
| Solyc03g123940.1.1 | Tomato | cytosol | 38.37 | 72.53 |
| HORVU5Hr1G101600.1 | Barley | cytosol, nucleus, plastid | 66.28 | 69.51 |
| HORVU5Hr1G081590.1 | Barley | cytosol, plastid | 64.53 | 68.52 |
| PGSC0003DMT400050885 | Potato | cytosol | 59.3 | 66.23 |
| CDX85095 | Canola | cytosol, plastid | 60.47 | 65.41 |
| CDY09010 | Canola | cytosol, mitochondrion | 57.56 | 64.71 |
| HORVU2Hr1G045920.1 | Barley | cytosol, plastid | 65.7 | 62.43 |
| GSMUA_Achr9P11710_001 | Banana | cytosol | 62.21 | 61.14 |
| AT4G14320.2 | Thale cress | cytosol | 49.42 | 55.19 |
| PGSC0003DMT400021706 | Potato | nucleus | 57.56 | 34.49 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 61.63 | 30.11 |
Protein Annotations
| MapMan:17.1.2.1.38 | Gene3D:3.10.450.80 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:HORVU7Hr1G104300 |
| EnsemblPlants:HORVU7Hr1G104300.1 | UniProt:M0XH89 | PFAM:PD002841 | PFAM:PF00935 | ScanProsite:PS01172 | PANTHER:PTHR10369 |
| InterPro:Ribosomal_L44e | InterPro:Ribosomal_zn-bd | SUPFAM:SSF57829 | UniParc:UPI0002952523 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:-:614313968..614318441
Molecular Weight (calculated)
19017.2 Da
IEP (calculated)
11.586
GRAVY (calculated)
-0.924
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLHRDPPA ARRARRQGTL AAGAPVYNRA PLRSPTLSAF GGGGALLVSS SSSSRRRRLR STAASAAMVN VPKTKKTYCK NKECKKHTLH KVTQYKKGKD
101: SLSAQGKRRY DRKQSGYGGQ TKPVFHKKAK TTKKIVLKLQ CQSCKHYSQR AIKRCKHFEI GGDKKGKGTS LF
101: SLSAQGKRRY DRKQSGYGGQ TKPVFHKKAK TTKKIVLKLQ CQSCKHYSQR AIKRCKHFEI GGDKKGKGTS LF
001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF
101: GTSLF
Arabidopsis Description
Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.