Factsheet for HORVU5Hr1G101600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:

nucleus 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G425600.1	Wheat	cytosol	64.02	100.0
TraesCS5A01G417600.1	Wheat	cytosol	64.02	100.0
Zm00001d021652_P001	Maize	cytosol	63.41	99.05
Zm00001d006510_P001	Maize	plasma membrane	63.41	99.05
EER96597	Sorghum	cytosol	63.41	99.05
Os07t0450000-01	Rice	cytosol	62.2	97.14
Os07t0523100-00	Rice	plastid	62.2	97.14
Os07t0523150-00	Rice	cytosol	62.2	97.14
Os07t0523700-02	Rice	cytosol	56.1	96.84
Os07t0523300-01	Rice	cytosol	56.1	96.84
Os07t0523500-02	Rice	cytosol	56.1	96.84
Solyc06g071530.2.1	Tomato	nucleus	60.37	94.29
PGSC0003DMT400046603	Potato	cytosol	59.76	93.33
PGSC0003DMT400069671	Potato	cytosol	59.76	93.33
Solyc03g112850.2.1	Tomato	cytosol	59.76	93.33
KRH43933	Soybean	cytosol	59.15	92.38
VIT_13s0064g00880.t01	Wine grape	cytosol	59.15	92.38
KRH58331	Soybean	cytosol	59.15	92.38
KRH42207	Soybean	cytosol	59.15	92.38
KRH10493	Soybean	nucleus	59.15	92.38
CDX90258	Canola	extracellular	59.15	91.51
CDX92983	Canola	cytosol	59.15	88.99
GSMUA_Achr9P24920_001	Banana	cytosol	59.76	86.73
GSMUA_Achr6P29350_001	Banana	extracellular	60.98	80.65
TraesCS5B01G419800.1	Wheat	cytosol	63.41	79.39
CDY49411	Canola	cytosol	60.98	78.74
CDY12759	Canola	cytosol	60.37	77.95
CDY12064	Canola	cytosol	61.59	77.69
VIT_01s0011g02090.t01	Wine grape	cytosol	58.54	77.42
Bra023728.1-P	Field mustard	cytosol	37.2	77.22
GSMUA_Achr6P00480_001	Banana	endoplasmic reticulum, extracellular	60.37	75.57
CDY18124	Canola	cytosol	61.59	73.72
CDX77519	Canola	cytosol	60.98	73.53
CDX94859	Canola	cytosol	60.98	73.53
Solyc03g123940.1.1	Tomato	cytosol	40.24	72.53
HORVU5Hr1G081590.1	Barley	cytosol, plastid	67.68	68.52
CDY09010	Canola	cytosol, mitochondrion	63.41	67.97
HORVU7Hr1G104300.1	Barley	nucleus	69.51	66.28
CDX85095	Canola	cytosol, plastid	63.41	65.41
PGSC0003DMT400050885	Potato	cytosol	59.76	63.64
HORVU2Hr1G045920.1	Barley	cytosol, plastid	67.07	60.77
GSMUA_Achr9P11710_001	Banana	cytosol	63.41	59.43
AT4G14320.2	Thale cress	cytosol	51.83	55.19
PGSC0003DMT400021706	Potato	nucleus	59.15	33.8
VIT_01s0011g02080.t01	Wine grape	nucleus, plastid	59.76	27.84

Protein Annotations

MapMan:17.1.2.1.38	Gene3D:3.10.450.80	UniProt:A0A287SI40	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G101600
EnsemblPlants:HORVU5Hr1G101600.1	PFAM:PD002841	PFAM:PF00935	ScanProsite:PS01172	PANTHER:PTHR10369	InterPro:Ribosomal_L44e
InterPro:Ribosomal_zn-bd	SUPFAM:SSF57829	UniParc:UPI000B46C6CE	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:612888182..612890622

Molecular Weight (calculated)

18392.2 Da

IEP (calculated)

11.108

GRAVY (calculated)

-1.189

Length

164 amino acids

Sequence
(BLAST)

001: HQPGSERRAC SGSSEPSASP APKPYNYDAR ALAANLPHAS RRRRQPTERA HRTAAAVAAM VNVPKTKKTY CKNKECKKHT LHKVTQYKKG KDSLSAQGKR
101: RYDRKQSGYG GQTKPVFHKK AKTTKKIVLK LQCQSCKHYS QRAIKRCKHF EIGGDKKGKG TSLF

Best Arabidopsis Sequence Match ( AT3G23390.1 )
(BLAST)

001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF

Arabidopsis Description

RPL36AB60S ribosomal protein L36a [Source:UniProtKB/Swiss-Prot;Acc:O23290]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.