Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001911.1-P | Field mustard | cytosol | 77.21 | 100.0 |
| CDX90258 | Canola | extracellular | 76.47 | 98.11 |
| AT3G23390.1 | Thale cress | cytosol | 74.26 | 96.19 |
| CDX92983 | Canola | cytosol | 76.47 | 95.41 |
| Solyc03g112850.2.1 | Tomato | cytosol | 73.53 | 95.24 |
| Solyc06g071530.2.1 | Tomato | nucleus | 73.53 | 95.24 |
| PGSC0003DMT400069671 | Potato | cytosol | 73.53 | 95.24 |
| PGSC0003DMT400046603 | Potato | cytosol | 73.53 | 95.24 |
| EER90549 | Sorghum | cytosol | 72.79 | 94.29 |
| EER96597 | Sorghum | cytosol | 72.79 | 94.29 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 72.79 | 94.29 |
| Zm00001d006510_P001 | Maize | plasma membrane | 72.79 | 94.29 |
| Zm00001d021652_P001 | Maize | cytosol | 72.79 | 94.29 |
| Os07t0523300-01 | Rice | cytosol | 65.44 | 93.68 |
| Os07t0523500-02 | Rice | cytosol | 65.44 | 93.68 |
| Os07t0523700-02 | Rice | cytosol | 65.44 | 93.68 |
| Os07t0523100-00 | Rice | plastid | 72.06 | 93.33 |
| Os07t0523150-00 | Rice | cytosol | 72.06 | 93.33 |
| Os07t0450000-01 | Rice | cytosol | 72.06 | 93.33 |
| TraesCS2D01G226100.1 | Wheat | cytosol | 72.06 | 93.33 |
| TraesCS5A01G320100.1 | Wheat | cytosol | 72.06 | 93.33 |
| TraesCS5A01G417600.1 | Wheat | cytosol | 72.06 | 93.33 |
| TraesCS5B01G320300.1 | Wheat | cytosol | 72.06 | 93.33 |
| TraesCS5D01G425600.1 | Wheat | cytosol | 72.06 | 93.33 |
| TraesCS7A01G454700.1 | Wheat | cytosol | 72.06 | 93.33 |
| TraesCS7A01G454800.1 | Wheat | cytosol | 72.06 | 93.33 |
| TraesCS7D01G443900.1 | Wheat | cytosol | 72.06 | 93.33 |
| KRH58331 | Soybean | cytosol | 72.06 | 93.33 |
| KRH43933 | Soybean | cytosol | 72.06 | 93.33 |
| KRH42207 | Soybean | cytosol | 72.06 | 93.33 |
| KRH10493 | Soybean | nucleus | 72.06 | 93.33 |
| CDY12759 | Canola | cytosol | 80.15 | 85.83 |
| CDY49411 | Canola | cytosol | 80.15 | 85.83 |
| GSMUA_Achr9P24920_001 | Banana | cytosol | 69.85 | 84.07 |
| CDY12064 | Canola | cytosol | 79.41 | 83.08 |
| CDX77519 | Canola | cytosol | 80.88 | 80.88 |
| OQU90027 | Sorghum | cytosol | 57.35 | 79.59 |
| CDY18124 | Canola | cytosol | 80.15 | 79.56 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 72.06 | 79.03 |
| GSMUA_Achr6P29350_001 | Banana | extracellular | 71.32 | 78.23 |
| Solyc03g123940.1.1 | Tomato | cytosol | 50.0 | 74.73 |
| TraesCS5B01G419800.1 | Wheat | cytosol | 71.32 | 74.05 |
| GSMUA_Achr6P00480_001 | Banana | endoplasmic reticulum, extracellular | 70.59 | 73.28 |
| CDY09010 | Canola | cytosol, mitochondrion | 79.41 | 70.59 |
| CDX85095 | Canola | cytosol, plastid | 80.15 | 68.55 |
| PGSC0003DMT400050885 | Potato | cytosol | 75.0 | 66.23 |
| TraesCS2B01G246000.1 | Wheat | golgi | 74.26 | 64.33 |
| Zm00001d019562_P003 | Maize | cytosol | 71.32 | 63.82 |
| HORVU5Hr1G081590.1 | Barley | cytosol, plastid | 75.0 | 62.96 |
| HORVU5Hr1G101600.1 | Barley | cytosol, nucleus, plastid | 73.53 | 60.98 |
| HORVU7Hr1G104300.1 | Barley | nucleus | 73.53 | 58.14 |
| HORVU2Hr1G045920.1 | Barley | cytosol, plastid | 75.0 | 56.35 |
| GSMUA_Achr9P11710_001 | Banana | cytosol | 72.06 | 56.0 |
| KXG25018 | Sorghum | mitochondrion | 28.68 | 49.37 |
| Zm00001d028202_P001 | Maize | cytosol | 33.82 | 46.46 |
| OQU83445 | Sorghum | mitochondrion | 25.74 | 43.21 |
| TraesCS5D01G326000.2 | Wheat | cytosol, nucleus | 61.76 | 39.62 |
| KXG28543 | Sorghum | mitochondrion | 30.88 | 38.53 |
| PGSC0003DMT400021706 | Potato | nucleus | 72.06 | 34.15 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 72.79 | 28.12 |
Protein Annotations
| MapMan:17.1.2.1.38 | Gene3D:3.10.450.80 | GO:A0A078E2M3 | EnsemblPlants:CDX94859 | ProteinID:CDX94859 | ProteinID:CDX94859.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00158393001 | PFAM:PD002841 | PFAM:PF00935 | ScanProsite:PS01172 |
| PANTHER:PTHR10369 | InterPro:Ribosomal_L44e | InterPro:Ribosomal_zn-bd | SUPFAM:SSF57829 | UniParc:UPI0004EF3642 | SEG:seg |
Description
BnaC03g43290D
Coordinates
chrLK031885:-:853976..855203
Molecular Weight (calculated)
15583.0 Da
IEP (calculated)
10.929
GRAVY (calculated)
-1.142
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGYQKPINP PSHLTPDDDG TQASFTVRRA KMVNIPKTKK TYCKNKECKK HTLHKVTQYK KGKDSLAAQG KRRYDRKQSG YGGQTKPVFH KKAKTTKKIV
101: LRLQCQTCKH FSQHSIKRCK HFEIGGDKKG KGTSLF
101: LRLQCQTCKH FSQHSIKRCK HFEIGGDKKG KGTSLF
001: MASFTCSSPS SILPIIDTRS GNLRCTFQSQ VSCGIQRDDN GRRVWRRRTL VSTKLDILTK KDDMLRYKMQ RVPFVEEQVR KIREVGKVMT MDIEQLLLRE
101: DNRFEFVNSV AAEATEYVDK NRDEYGGSKK AIFHVLSNRV NDLGFDRPEA YVEADPYKPG PGYLLEYYT
101: DNRFEFVNSV AAEATEYVDK NRDEYGGSKK AIFHVLSNRV NDLGFDRPEA YVEADPYKPG PGYLLEYYT
Arabidopsis Description
PTAC7plastid transcriptionally active7 [Source:TAIR;Acc:AT5G24314]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.