Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G425600.1 | Wheat | cytosol | 79.39 | 99.05 |
| TraesCS5B01G320300.1 | Wheat | cytosol | 79.39 | 99.05 |
| TraesCS5A01G417600.1 | Wheat | cytosol | 79.39 | 99.05 |
| Zm00001d021652_P001 | Maize | cytosol | 78.63 | 98.1 |
| Zm00001d006510_P001 | Maize | plasma membrane | 78.63 | 98.1 |
| EER96597 | Sorghum | cytosol | 78.63 | 98.1 |
| Os07t0523700-02 | Rice | cytosol | 70.23 | 96.84 |
| Os07t0523500-02 | Rice | cytosol | 70.23 | 96.84 |
| Os07t0523300-01 | Rice | cytosol | 70.23 | 96.84 |
| Os07t0450000-01 | Rice | cytosol | 77.1 | 96.19 |
| Os07t0523150-00 | Rice | cytosol | 77.1 | 96.19 |
| Os07t0523100-00 | Rice | plastid | 77.1 | 96.19 |
| Solyc06g071530.2.1 | Tomato | nucleus | 74.81 | 93.33 |
| PGSC0003DMT400046603 | Potato | cytosol | 74.05 | 92.38 |
| PGSC0003DMT400069671 | Potato | cytosol | 74.05 | 92.38 |
| Solyc03g112850.2.1 | Tomato | cytosol | 74.05 | 92.38 |
| CDX90258 | Canola | extracellular | 74.05 | 91.51 |
| KRH58331 | Soybean | cytosol | 73.28 | 91.43 |
| KRH43933 | Soybean | cytosol | 73.28 | 91.43 |
| KRH42207 | Soybean | cytosol | 73.28 | 91.43 |
| KRH10493 | Soybean | nucleus | 73.28 | 91.43 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 73.28 | 91.43 |
| CDX92983 | Canola | cytosol | 74.05 | 88.99 |
| GSMUA_Achr9P24920_001 | Banana | cytosol | 74.81 | 86.73 |
| GSMUA_Achr6P29350_001 | Banana | extracellular | 76.34 | 80.65 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 73.28 | 77.42 |
| Bra023728.1-P | Field mustard | cytosol | 46.56 | 77.22 |
| CDY12759 | Canola | cytosol | 74.05 | 76.38 |
| CDY49411 | Canola | cytosol | 74.05 | 76.38 |
| GSMUA_Achr6P00480_001 | Banana | endoplasmic reticulum, extracellular | 75.57 | 75.57 |
| CDY12064 | Canola | cytosol | 74.05 | 74.62 |
| Solyc03g123940.1.1 | Tomato | cytosol | 49.62 | 71.43 |
| CDX94859 | Canola | cytosol | 74.05 | 71.32 |
| CDX77519 | Canola | cytosol | 74.05 | 71.32 |
| CDY18124 | Canola | cytosol | 74.05 | 70.8 |
| TraesCS2B01G246000.1 | Wheat | golgi | 79.39 | 66.24 |
| HORVU5Hr1G101600.1 | Barley | cytosol, nucleus, plastid | 79.39 | 63.41 |
| CDY09010 | Canola | cytosol, mitochondrion | 74.05 | 63.4 |
| PGSC0003DMT400050885 | Potato | cytosol | 74.05 | 62.99 |
| CDX85095 | Canola | cytosol, plastid | 74.05 | 61.01 |
| GSMUA_Achr9P11710_001 | Banana | cytosol | 75.57 | 56.57 |
| AT4G14320.2 | Thale cress | cytosol | 64.12 | 54.55 |
| PGSC0003DMT400021706 | Potato | nucleus | 68.7 | 31.36 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 73.28 | 27.27 |
Protein Annotations
| MapMan:17.1.2.1.38 | Gene3D:3.10.450.80 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | PFAM:PD002841 | PFAM:PF00935 |
| ScanProsite:PS01172 | InterPro:Ribosomal_L44e | InterPro:Ribosomal_zn-bd | SUPFAM:SSF57829 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G419800 |
| EnsemblPlants:TraesCS5B01G419800.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:595622302..595622848
Molecular Weight (calculated)
15135.7 Da
IEP (calculated)
10.728
GRAVY (calculated)
-0.728
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: VNVPKTKKTY CKNKECKKHT LHKVTQYKKG KDSLSAQGKR RYDRKQSGYG GQTKPVFHKK AKTTKKIVLK LQCQSCKHYS QRAIKVCFFF SCTEHLFFVP
101: LCFAQPVFIP LQRCKHFEIG GDKKGKGTSL F
101: LCFAQPVFIP LQRCKHFEIG GDKKGKGTSL F
001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF
101: GTSLF
Arabidopsis Description
RPL36AB60S ribosomal protein L36a [Source:UniProtKB/Swiss-Prot;Acc:O23290]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.