Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001911.1-P | Field mustard | cytosol | 82.68 | 100.0 |
| CDY12759 | Canola | cytosol | 98.43 | 98.43 |
| CDX90258 | Canola | extracellular | 81.89 | 98.11 |
| AT3G23390.1 | Thale cress | cytosol | 79.53 | 96.19 |
| CDX92983 | Canola | cytosol | 81.89 | 95.41 |
| Solyc03g112850.2.1 | Tomato | cytosol | 78.74 | 95.24 |
| Solyc06g071530.2.1 | Tomato | nucleus | 78.74 | 95.24 |
| PGSC0003DMT400069671 | Potato | cytosol | 78.74 | 95.24 |
| PGSC0003DMT400046603 | Potato | cytosol | 78.74 | 95.24 |
| EER90549 | Sorghum | cytosol | 77.95 | 94.29 |
| EER96597 | Sorghum | cytosol | 77.95 | 94.29 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 77.95 | 94.29 |
| Zm00001d006510_P001 | Maize | plasma membrane | 77.95 | 94.29 |
| Zm00001d021652_P001 | Maize | cytosol | 77.95 | 94.29 |
| Os07t0523300-01 | Rice | cytosol | 70.08 | 93.68 |
| Os07t0523500-02 | Rice | cytosol | 70.08 | 93.68 |
| Os07t0523700-02 | Rice | cytosol | 70.08 | 93.68 |
| Os07t0523100-00 | Rice | plastid | 77.17 | 93.33 |
| Os07t0523150-00 | Rice | cytosol | 77.17 | 93.33 |
| Os07t0450000-01 | Rice | cytosol | 77.17 | 93.33 |
| TraesCS2D01G226100.1 | Wheat | cytosol | 77.17 | 93.33 |
| TraesCS5A01G320100.1 | Wheat | cytosol | 77.17 | 93.33 |
| TraesCS5A01G417600.1 | Wheat | cytosol | 77.17 | 93.33 |
| TraesCS5B01G320300.1 | Wheat | cytosol | 77.17 | 93.33 |
| TraesCS5D01G425600.1 | Wheat | cytosol | 77.17 | 93.33 |
| TraesCS7A01G454700.1 | Wheat | cytosol | 77.17 | 93.33 |
| TraesCS7A01G454800.1 | Wheat | cytosol | 77.17 | 93.33 |
| TraesCS7D01G443900.1 | Wheat | cytosol | 77.17 | 93.33 |
| KRH58331 | Soybean | cytosol | 77.17 | 93.33 |
| KRH43933 | Soybean | cytosol | 77.17 | 93.33 |
| KRH42207 | Soybean | cytosol | 77.17 | 93.33 |
| KRH10493 | Soybean | nucleus | 77.17 | 93.33 |
| CDY12064 | Canola | cytosol | 87.4 | 85.38 |
| GSMUA_Achr9P24920_001 | Banana | cytosol | 74.8 | 84.07 |
| CDX94859 | Canola | cytosol | 85.83 | 80.15 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 77.95 | 79.84 |
| OQU90027 | Sorghum | cytosol | 61.42 | 79.59 |
| CDY18124 | Canola | cytosol | 85.83 | 79.56 |
| CDX77519 | Canola | cytosol | 85.04 | 79.41 |
| GSMUA_Achr6P29350_001 | Banana | extracellular | 75.59 | 77.42 |
| Solyc03g123940.1.1 | Tomato | cytosol | 53.54 | 74.73 |
| TraesCS5B01G419800.1 | Wheat | cytosol | 76.38 | 74.05 |
| GSMUA_Achr6P00480_001 | Banana | endoplasmic reticulum, extracellular | 74.8 | 72.52 |
| CDY09010 | Canola | cytosol, mitochondrion | 85.83 | 71.24 |
| CDX85095 | Canola | cytosol, plastid | 85.04 | 67.92 |
| PGSC0003DMT400050885 | Potato | cytosol | 78.74 | 64.94 |
| Zm00001d019562_P003 | Maize | cytosol | 76.38 | 63.82 |
| TraesCS2B01G246000.1 | Wheat | golgi | 77.95 | 63.06 |
| HORVU5Hr1G081590.1 | Barley | cytosol, plastid | 77.95 | 61.11 |
| HORVU5Hr1G101600.1 | Barley | cytosol, nucleus, plastid | 78.74 | 60.98 |
| HORVU7Hr1G104300.1 | Barley | nucleus | 79.53 | 58.72 |
| GSMUA_Achr9P11710_001 | Banana | cytosol | 78.74 | 57.14 |
| HORVU2Hr1G045920.1 | Barley | cytosol, plastid | 78.74 | 55.25 |
| KXG25018 | Sorghum | mitochondrion | 29.92 | 48.1 |
| Zm00001d028202_P001 | Maize | cytosol | 36.22 | 46.46 |
| OQU83445 | Sorghum | mitochondrion | 25.98 | 40.74 |
| TraesCS5D01G326000.2 | Wheat | cytosol, nucleus | 66.14 | 39.62 |
| KXG28543 | Sorghum | mitochondrion | 31.5 | 36.7 |
| PGSC0003DMT400021706 | Potato | nucleus | 75.59 | 33.45 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 79.53 | 28.69 |
Protein Annotations
| MapMan:17.1.2.1.38 | Gene3D:3.10.450.80 | GO:A0A078IHE2 | UniProt:A0A078IHE2 | EnsemblPlants:CDY49411 | ProteinID:CDY49411 |
| ProteinID:CDY49411.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00092983001 | PFAM:PD002841 |
| PFAM:PF00935 | ScanProsite:PS01172 | PANTHER:PTHR10369 | InterPro:Ribosomal_L44e | InterPro:Ribosomal_zn-bd | SUPFAM:SSF57829 |
| UniParc:UPI0004EF2BA5 | SEG:seg | : | : | : | : |
Description
BnaCnng17210DBnaCnng17210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHE2]
Coordinates
chrLK032831:-:48679..50064
Molecular Weight (calculated)
14685.0 Da
IEP (calculated)
10.980
GRAVY (calculated)
-1.194
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDKALGFHE DGDGRSFHRR AKMVNIPKTK KTYCKNKECK KHTLHKVTQY KKGKDSLAAQ GKRRYDRKQS GYGGQTKPVF HKKAKTTKKI VLRLQCQTCK
101: HFSQHSIKRC KHFEIGGDKK GKGTSLF
101: HFSQHSIKRC KHFEIGGDKK GKGTSLF
001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF
101: GTSLF
Arabidopsis Description
Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.