CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96597	Sorghum	cytosol	85.71	80.0
Os07t0450000-01	Rice	cytosol	83.67	78.1
Os07t0523150-00	Rice	cytosol	83.67	78.1
Os07t0523100-00	Rice	plastid	83.67	78.1
EER90549	Sorghum	cytosol	82.65	77.14
Os07t0523700-02	Rice	cytosol	74.49	76.84
Os07t0523500-02	Rice	cytosol	74.49	76.84
Os07t0523300-01	Rice	cytosol	74.49	76.84
Solyc06g071530.2.1	Tomato	nucleus	80.61	75.24
PGSC0003DMT400069671	Potato	cytosol	79.59	74.29
Solyc03g112850.2.1	Tomato	cytosol	79.59	74.29
PGSC0003DMT400046603	Potato	cytosol	79.59	74.29
CDX90258	Canola	extracellular	79.59	73.58
KRH10493	Soybean	nucleus	78.57	73.33
KRH58331	Soybean	cytosol	78.57	73.33
KRH43933	Soybean	cytosol	78.57	73.33
KRH42207	Soybean	cytosol	78.57	73.33
VIT_13s0064g00880.t01	Wine grape	cytosol	78.57	73.33
CDX92983	Canola	cytosol	79.59	71.56
GSMUA_Achr9P24920_001	Banana	cytosol	81.63	70.8
GSMUA_Achr6P29350_001	Banana	extracellular	83.67	66.13
VIT_01s0011g02090.t01	Wine grape	cytosol	78.57	62.1
GSMUA_Achr6P00480_001	Banana	endoplasmic reticulum, extracellular	82.65	61.83
CDY49411	Canola	cytosol	79.59	61.42
CDY12759	Canola	cytosol	79.59	61.42
CDY12064	Canola	cytosol	79.59	60.0
CDX77519	Canola	cytosol	79.59	57.35
CDX94859	Canola	cytosol	79.59	57.35
CDY18124	Canola	cytosol	79.59	56.93
Solyc03g123940.1.1	Tomato	cytosol	51.02	54.95
Bra023728.1-P	Field mustard	cytosol	42.86	53.16
PGSC0003DMT400050885	Potato	cytosol	81.63	51.95
CDY09010	Canola	cytosol, mitochondrion	79.59	50.98
Zm00001d028202_P001	Maize	cytosol	50.0	49.49
CDX85095	Canola	cytosol, plastid	79.59	49.06
GSMUA_Achr9P11710_001	Banana	cytosol	81.63	45.71
KXG25018	Sorghum	mitochondrion	35.71	44.3
OQU83445	Sorghum	mitochondrion	32.65	39.51
TraesCS5D01G326000.2	Wheat	cytosol, nucleus	84.69	39.15
KXG28543	Sorghum	mitochondrion	36.73	33.03
PGSC0003DMT400021706	Potato	nucleus	75.51	25.78
VIT_01s0011g02080.t01	Wine grape	nucleus, plastid	79.59	22.16

Protein Annotations

MapMan:17.1.2.1.38	Gene3D:3.10.450.80	UniProt:A0A1W0W6K3	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529
EnsemblPlants:OQU90027	ProteinID:OQU90027	ProteinID:OQU90027.1	PFAM:PD002841	PFAM:PF00935	ScanProsite:PS01172
PANTHER:PTHR10369	InterPro:Ribosomal_L44e	InterPro:Ribosomal_zn-bd	EnsemblPlantsGene:SORBI_3002G321800	SUPFAM:SSF57829	UniParc:UPI0009DC85C3
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:69340277..69341030

Molecular Weight (calculated)

11279.9 Da

IEP (calculated)

10.788

GRAVY (calculated)

-1.061

Length

98 amino acids

Sequence
(BLAST)

1: MASSIMPHCV NVPKTKKTYC KNKECKKHTL HKVTQYKKGK DSLSAQGKRR YDHKQSGYGG QTKPVFHKKA KTTKKIMLKL QCQSCKHYSQ HAIKVQAF

Best Arabidopsis Sequence Match ( AT4G14320.2 )
(BLAST)

001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIVLIESCA
101: GKMVDEMIFS CVCCGGPGCC GDRGEGPVGG GIDNEPVNVV VVVVEPGSQR RKMW

Arabidopsis Description

Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.