Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033491.1-P | Field mustard | cytosol | 95.41 | 99.05 |
| CDX90258 | Canola | extracellular | 95.41 | 98.11 |
| AT3G23390.1 | Thale cress | cytosol | 91.74 | 95.24 |
| Solyc03g112850.2.1 | Tomato | cytosol | 90.83 | 94.29 |
| Solyc06g071530.2.1 | Tomato | nucleus | 90.83 | 94.29 |
| PGSC0003DMT400069671 | Potato | cytosol | 90.83 | 94.29 |
| PGSC0003DMT400046603 | Potato | cytosol | 90.83 | 94.29 |
| Os07t0523300-01 | Rice | cytosol | 81.65 | 93.68 |
| Os07t0523500-02 | Rice | cytosol | 81.65 | 93.68 |
| Os07t0523700-02 | Rice | cytosol | 81.65 | 93.68 |
| EER90549 | Sorghum | cytosol | 89.91 | 93.33 |
| EER96597 | Sorghum | cytosol | 89.91 | 93.33 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 89.91 | 93.33 |
| Zm00001d006510_P001 | Maize | plasma membrane | 89.91 | 93.33 |
| Zm00001d021652_P001 | Maize | cytosol | 89.91 | 93.33 |
| Os07t0523100-00 | Rice | plastid | 88.99 | 92.38 |
| Os07t0523150-00 | Rice | cytosol | 88.99 | 92.38 |
| Os07t0450000-01 | Rice | cytosol | 88.99 | 92.38 |
| TraesCS2D01G226100.1 | Wheat | cytosol | 88.99 | 92.38 |
| TraesCS5A01G320100.1 | Wheat | cytosol | 88.99 | 92.38 |
| TraesCS5A01G417600.1 | Wheat | cytosol | 88.99 | 92.38 |
| TraesCS5B01G320300.1 | Wheat | cytosol | 88.99 | 92.38 |
| TraesCS5D01G425600.1 | Wheat | cytosol | 88.99 | 92.38 |
| TraesCS7A01G454700.1 | Wheat | cytosol | 88.99 | 92.38 |
| TraesCS7A01G454800.1 | Wheat | cytosol | 88.99 | 92.38 |
| TraesCS7D01G443900.1 | Wheat | cytosol | 88.99 | 92.38 |
| KRH58331 | Soybean | cytosol | 88.99 | 92.38 |
| KRH43933 | Soybean | cytosol | 88.99 | 92.38 |
| KRH42207 | Soybean | cytosol | 88.99 | 92.38 |
| KRH10493 | Soybean | nucleus | 88.99 | 92.38 |
| GSMUA_Achr9P24920_001 | Banana | cytosol | 86.24 | 83.19 |
| CDY12759 | Canola | cytosol | 95.41 | 81.89 |
| CDY49411 | Canola | cytosol | 95.41 | 81.89 |
| CDY12064 | Canola | cytosol | 95.41 | 80.0 |
| OQU90027 | Sorghum | cytosol | 71.56 | 79.59 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 89.91 | 79.03 |
| GSMUA_Achr6P29350_001 | Banana | extracellular | 88.99 | 78.23 |
| CDX77519 | Canola | cytosol | 95.41 | 76.47 |
| CDX94859 | Canola | cytosol | 95.41 | 76.47 |
| CDY18124 | Canola | cytosol | 95.41 | 75.91 |
| TraesCS5B01G419800.1 | Wheat | cytosol | 88.99 | 74.05 |
| Solyc03g123940.1.1 | Tomato | cytosol | 61.47 | 73.63 |
| GSMUA_Achr6P00480_001 | Banana | endoplasmic reticulum, extracellular | 88.07 | 73.28 |
| CDY09010 | Canola | cytosol, mitochondrion | 95.41 | 67.97 |
| CDX85095 | Canola | cytosol, plastid | 95.41 | 65.41 |
| Zm00001d019562_P003 | Maize | cytosol | 89.91 | 64.47 |
| PGSC0003DMT400050885 | Potato | cytosol | 90.83 | 64.29 |
| TraesCS2B01G246000.1 | Wheat | golgi | 88.99 | 61.78 |
| HORVU5Hr1G081590.1 | Barley | cytosol, plastid | 88.99 | 59.88 |
| HORVU5Hr1G101600.1 | Barley | cytosol, nucleus, plastid | 88.99 | 59.15 |
| HORVU7Hr1G104300.1 | Barley | nucleus | 88.99 | 56.4 |
| GSMUA_Achr9P11710_001 | Banana | cytosol | 87.16 | 54.29 |
| HORVU2Hr1G045920.1 | Barley | cytosol, plastid | 88.99 | 53.59 |
| KXG25018 | Sorghum | mitochondrion | 33.95 | 46.84 |
| Zm00001d028202_P001 | Maize | cytosol | 42.2 | 46.46 |
| OQU83445 | Sorghum | mitochondrion | 30.28 | 40.74 |
| TraesCS5D01G326000.2 | Wheat | cytosol, nucleus | 77.06 | 39.62 |
| KXG28543 | Sorghum | mitochondrion | 36.7 | 36.7 |
| PGSC0003DMT400021706 | Potato | nucleus | 84.4 | 32.06 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 89.91 | 27.84 |
Protein Annotations
| MapMan:17.1.2.1.38 | Gene3D:3.10.450.80 | GO:A0A078E077 | EnsemblPlants:CDX92983 | ProteinID:CDX92983 | ProteinID:CDX92983.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00154866001 | PFAM:PD002841 | PFAM:PF00935 | ScanProsite:PS01172 |
| PANTHER:PTHR10369 | InterPro:Ribosomal_L44e | InterPro:Ribosomal_zn-bd | SUPFAM:SSF57829 | UniParc:UPI0004EEFF76 | SEG:seg |
Description
BnaA03g37050D
Coordinates
chrLK031874:+:467274..468311
Molecular Weight (calculated)
12616.6 Da
IEP (calculated)
10.960
GRAVY (calculated)
-1.105
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCLKVNIPK TKKTYCKNKE CKKHTLHKVT QYKKGKDSLA AQGKRRYDRK QSGYGGQTKP VFHKKAKTTK KIVLRLQCQT CKHFSQHSIK RCKHFEIGGD
101: KKGKGTSLF
101: KKGKGTSLF
001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF
101: GTSLF
Arabidopsis Description
RPL36AB60S ribosomal protein L36a [Source:UniProtKB/Swiss-Prot;Acc:O23290]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.