Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G226100.1 | Wheat | cytosol | 58.01 | 100.0 |
| Zm00001d021652_P001 | Maize | cytosol | 57.46 | 99.05 |
| Zm00001d006510_P001 | Maize | plasma membrane | 57.46 | 99.05 |
| EER96597 | Sorghum | cytosol | 57.46 | 99.05 |
| Os07t0450000-01 | Rice | cytosol | 56.35 | 97.14 |
| Os07t0523100-00 | Rice | plastid | 56.35 | 97.14 |
| Os07t0523150-00 | Rice | cytosol | 56.35 | 97.14 |
| Os07t0523700-02 | Rice | cytosol | 50.83 | 96.84 |
| Os07t0523300-01 | Rice | cytosol | 50.83 | 96.84 |
| Os07t0523500-02 | Rice | cytosol | 50.83 | 96.84 |
| Solyc06g071530.2.1 | Tomato | nucleus | 54.7 | 94.29 |
| PGSC0003DMT400046603 | Potato | cytosol | 54.14 | 93.33 |
| PGSC0003DMT400069671 | Potato | cytosol | 54.14 | 93.33 |
| Solyc03g112850.2.1 | Tomato | cytosol | 54.14 | 93.33 |
| KRH43933 | Soybean | cytosol | 53.59 | 92.38 |
| VIT_13s0064g00880.t01 | Wine grape | cytosol | 53.59 | 92.38 |
| KRH58331 | Soybean | cytosol | 53.59 | 92.38 |
| KRH42207 | Soybean | cytosol | 53.59 | 92.38 |
| KRH10493 | Soybean | nucleus | 53.59 | 92.38 |
| CDX90258 | Canola | extracellular | 53.59 | 91.51 |
| CDX92983 | Canola | cytosol | 53.59 | 88.99 |
| GSMUA_Achr9P24920_001 | Banana | cytosol | 54.14 | 86.73 |
| GSMUA_Achr6P29350_001 | Banana | extracellular | 55.25 | 80.65 |
| CDY12759 | Canola | cytosol | 55.25 | 78.74 |
| CDY49411 | Canola | cytosol | 55.25 | 78.74 |
| VIT_01s0011g02090.t01 | Wine grape | cytosol | 53.59 | 78.23 |
| Bra023728.1-P | Field mustard | cytosol | 33.7 | 77.22 |
| CDY12064 | Canola | cytosol | 55.25 | 76.92 |
| TraesCS2B01G246000.1 | Wheat | golgi | 66.3 | 76.43 |
| GSMUA_Achr6P00480_001 | Banana | endoplasmic reticulum, extracellular | 54.7 | 75.57 |
| CDX94859 | Canola | cytosol | 56.35 | 75.0 |
| CDX77519 | Canola | cytosol | 56.35 | 75.0 |
| CDY18124 | Canola | cytosol | 55.8 | 73.72 |
| Solyc03g123940.1.1 | Tomato | cytosol | 36.46 | 72.53 |
| HORVU5Hr1G081590.1 | Barley | cytosol, plastid | 62.43 | 69.75 |
| HORVU5Hr1G101600.1 | Barley | cytosol, nucleus, plastid | 60.77 | 67.07 |
| CDY09010 | Canola | cytosol, mitochondrion | 56.35 | 66.67 |
| HORVU7Hr1G104300.1 | Barley | nucleus | 62.43 | 65.7 |
| PGSC0003DMT400050885 | Potato | cytosol | 54.7 | 64.29 |
| CDX85095 | Canola | cytosol, plastid | 55.8 | 63.52 |
| GSMUA_Achr9P11710_001 | Banana | cytosol | 58.01 | 60.0 |
| AT4G14320.2 | Thale cress | cytosol | 46.96 | 55.19 |
| PGSC0003DMT400021706 | Potato | nucleus | 53.59 | 33.8 |
| VIT_01s0011g02080.t01 | Wine grape | nucleus, plastid | 57.46 | 29.55 |
Protein Annotations
| MapMan:17.1.2.1.38 | Gene3D:3.10.450.80 | UniProt:A0A287HW43 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| EnsemblPlantsGene:HORVU2Hr1G045920 | EnsemblPlants:HORVU2Hr1G045920.1 | PFAM:PD002841 | PFAM:PF00935 | ScanProsite:PS01172 | PANTHER:PTHR10369 |
| InterPro:Ribosomal_L44e | InterPro:Ribosomal_zn-bd | SUPFAM:SSF57829 | UniParc:UPI000B4735AB | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:-:242047594..242049629
Molecular Weight (calculated)
20249.8 Da
IEP (calculated)
11.366
GRAVY (calculated)
-1.014
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: LIGPPPALTK AQAFRPSIHK VAFRPMKEAT VSRLANPSSR QHRATKPHPS PSPPPLAATP PPEREARRSS ISSAVKMVNV PKTKKTYCKN KECKKHTLHK
101: VTQYKKGKDS LSAQGKRRYD RKQSGYGGQT KPVFHKKAKT TKKIVLKLQC QSCKHYSQRA IKRCKHFEIG GDKKGKGTSL F
101: VTQYKKGKDS LSAQGKRRYD RKQSGYGGQT KPVFHKKAKT TKKIVLKLQC QSCKHYSQRA IKRCKHFEIG GDKKGKGTSL F
001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF
101: GTSLF
Arabidopsis Description
Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.