CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014945.1-P	Field mustard	cytosol	66.04	100.0
CDX90258	Canola	extracellular	65.41	98.11
AT3G23390.1	Thale cress	cytosol	63.52	96.19
CDX92983	Canola	cytosol	65.41	95.41
Solyc03g112850.2.1	Tomato	cytosol	62.89	95.24
Solyc06g071530.2.1	Tomato	nucleus	62.89	95.24
PGSC0003DMT400069671	Potato	cytosol	62.89	95.24
PGSC0003DMT400046603	Potato	cytosol	62.89	95.24
EER90549	Sorghum	cytosol	62.26	94.29
EER96597	Sorghum	cytosol	62.26	94.29
VIT_13s0064g00880.t01	Wine grape	cytosol	62.26	94.29
Zm00001d006510_P001	Maize	plasma membrane	62.26	94.29
Zm00001d021652_P001	Maize	cytosol	62.26	94.29
Os07t0523300-01	Rice	cytosol	55.97	93.68
Os07t0523500-02	Rice	cytosol	55.97	93.68
Os07t0523700-02	Rice	cytosol	55.97	93.68
Os07t0523100-00	Rice	plastid	61.64	93.33
Os07t0523150-00	Rice	cytosol	61.64	93.33
Os07t0450000-01	Rice	cytosol	61.64	93.33
TraesCS2D01G226100.1	Wheat	cytosol	61.64	93.33
TraesCS5A01G320100.1	Wheat	cytosol	61.64	93.33
TraesCS5A01G417600.1	Wheat	cytosol	61.64	93.33
TraesCS5B01G320300.1	Wheat	cytosol	61.64	93.33
TraesCS5D01G425600.1	Wheat	cytosol	61.64	93.33
TraesCS7A01G454700.1	Wheat	cytosol	61.64	93.33
TraesCS7A01G454800.1	Wheat	cytosol	61.64	93.33
TraesCS7D01G443900.1	Wheat	cytosol	61.64	93.33
KRH58331	Soybean	cytosol	61.64	93.33
KRH43933	Soybean	cytosol	61.64	93.33
KRH42207	Soybean	cytosol	61.64	93.33
KRH10493	Soybean	nucleus	61.64	93.33
CDX77519	Canola	cytosol	74.84	87.5
CDY12759	Canola	cytosol	67.92	85.04
CDY49411	Canola	cytosol	67.92	85.04
GSMUA_Achr9P24920_001	Banana	cytosol	59.75	84.07
CDY12064	Canola	cytosol	67.92	83.08
CDX94859	Canola	cytosol	68.55	80.15
VIT_01s0011g02090.t01	Wine grape	cytosol	62.26	79.84
OQU90027	Sorghum	cytosol	49.06	79.59
CDY18124	Canola	cytosol	67.3	78.1
GSMUA_Achr6P29350_001	Banana	extracellular	60.38	77.42
Solyc03g123940.1.1	Tomato	cytosol	42.77	74.73
TraesCS5B01G419800.1	Wheat	cytosol	61.01	74.05
GSMUA_Achr6P00480_001	Banana	endoplasmic reticulum, extracellular	59.75	72.52
CDY09010	Canola	cytosol, mitochondrion	69.18	71.9
PGSC0003DMT400050885	Potato	cytosol	64.78	66.88
TraesCS2B01G246000.1	Wheat	golgi	64.15	64.97
HORVU5Hr1G081590.1	Barley	cytosol, plastid	65.41	64.2
Zm00001d019562_P003	Maize	cytosol	61.01	63.82
HORVU5Hr1G101600.1	Barley	cytosol, nucleus, plastid	65.41	63.41
HORVU7Hr1G104300.1	Barley	nucleus	65.41	60.47
GSMUA_Achr9P11710_001	Banana	cytosol	63.52	57.71
HORVU2Hr1G045920.1	Barley	cytosol, plastid	63.52	55.8
KXG25018	Sorghum	mitochondrion	23.27	46.84
Zm00001d028202_P001	Maize	cytosol	28.93	46.46
OQU83445	Sorghum	mitochondrion	22.01	43.21
KXG28543	Sorghum	mitochondrion	27.67	40.37
TraesCS5D01G326000.2	Wheat	cytosol, nucleus	52.83	39.62
PGSC0003DMT400021706	Potato	nucleus	62.89	34.84
VIT_01s0011g02080.t01	Wine grape	nucleus, plastid	63.52	28.69

Protein Annotations

MapMan:17.1.2.1.38	Gene3D:3.10.450.80	GO:A0A078D7K7	EnsemblPlants:CDX85095	ProteinID:CDX85095	ProteinID:CDX85095.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00142568001	PFAM:PD002841	PFAM:PF00935	ScanProsite:PS01172
PANTHER:PTHR10369	InterPro:Ribosomal_L44e	InterPro:Ribosomal_zn-bd	SUPFAM:SSF57829	TMHMM:TMhelix	UniParc:UPI0004EF3540
SEG:seg	:	:	:	:	:

Description

BnaC07g08110D

Coordinates

chrLK031840:+:334845..337472

Molecular Weight (calculated)

17968.9 Da

IEP (calculated)

11.260

GRAVY (calculated)

-0.838

Length

159 amino acids

Sequence
(BLAST)

001: MSRTDCLSSA SSRTVTRSTP PGVWTCTALV FAGFPALAVR RRHTRFTGDF RGATMVNIPK TKKTYCKNKE CKKHTLHKVT QYKKGKDSLA AQGKRRYDRK
101: QSGYGGQTKP VFHKKAKTTK KIVLRLQCQT CKHFSQHSIK RCKHFEIGGD KKGKGTSLF

Best Arabidopsis Sequence Match ( AT4G14320.1 )
(BLAST)

001: MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK
101: GTSLF

Arabidopsis Description

Zinc-binding ribosomal protein family protein [Source:UniProtKB/TrEMBL;Acc:F4JUQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.