Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G01925.1 | Thale cress | cytosol | 29.86 | 67.5 |
| CDY52789 | Canola | cytosol | 43.13 | 67.24 |
| CDX97701 | Canola | cytosol | 22.43 | 66.98 |
| CDY22034 | Canola | endoplasmic reticulum | 60.66 | 61.05 |
| CDY69979 | Canola | nucleus | 57.35 | 56.99 |
| CDY50383 | Canola | cytosol | 75.67 | 56.82 |
| CDY52787 | Canola | nucleus | 56.24 | 56.42 |
| CDY65338 | Canola | cytosol | 57.03 | 53.88 |
| CDY22036 | Canola | cytosol | 48.66 | 51.68 |
| AT4G11540.1 | Thale cress | cytosol | 42.02 | 50.67 |
| AT4G01930.1 | Thale cress | cytosol | 50.87 | 49.39 |
| AT4G01910.1 | Thale cress | cytosol | 50.24 | 48.85 |
| AT4G01920.1 | Thale cress | cytosol | 50.08 | 48.18 |
| CDY21921 | Canola | plastid | 28.75 | 47.89 |
| AT4G01740.1 | Thale cress | cytosol | 48.18 | 46.78 |
| AT4G02190.1 | Thale cress | cytosol | 48.5 | 46.59 |
| AT4G11550.1 | Thale cress | cytosol | 48.66 | 46.11 |
| AT4G01760.1 | Thale cress | cytosol | 48.5 | 46.03 |
| CDY52927 | Canola | cytosol | 27.01 | 45.36 |
| CDY06776 | Canola | cytosol | 20.38 | 45.26 |
| CDY29992 | Canola | cytosol | 18.33 | 44.27 |
| CDY48718 | Canola | cytosol | 25.75 | 43.94 |
| CDY50382 | Canola | cytosol | 63.03 | 40.22 |
| CDY63460 | Canola | cytosol, mitochondrion | 26.38 | 40.14 |
| CDY22035 | Canola | cytosol | 54.98 | 39.28 |
| CDX74184 | Canola | plasma membrane | 25.28 | 39.02 |
| CDX74183 | Canola | cytosol | 21.17 | 38.95 |
| CDX67463 | Canola | cytosol | 25.91 | 35.34 |
| CDY09240 | Canola | cytosol | 25.12 | 33.47 |
| CDY09238 | Canola | cytosol | 25.12 | 33.47 |
| AT4G11390.2 | Thale cress | cytosol | 28.44 | 32.97 |
| AT4G02180.1 | Thale cress | cytosol | 51.5 | 32.96 |
| CDY46706 | Canola | mitochondrion | 26.22 | 31.14 |
| CDY51540 | Canola | nucleus | 24.96 | 30.8 |
| CDX93183 | Canola | cytosol | 32.23 | 30.63 |
| CDY28703 | Canola | cytosol | 23.7 | 30.12 |
| CDY42579 | Canola | nucleus | 12.8 | 29.56 |
| CDX71062 | Canola | cytosol | 28.75 | 29.07 |
| CDX88733 | Canola | cytosol | 28.44 | 28.85 |
| CDY63456 | Canola | cytosol | 17.54 | 28.1 |
| CDY58516 | Canola | nucleus | 22.27 | 28.09 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 29.38 | 27.97 |
| CDY41709 | Canola | peroxisome | 23.22 | 27.95 |
| CDY36839 | Canola | cytosol | 26.7 | 27.93 |
| CDY27940 | Canola | cytosol | 24.64 | 27.66 |
| CDY43524 | Canola | cytosol | 21.96 | 27.47 |
| CDY30196 | Canola | cytosol | 17.69 | 27.38 |
| CDY64703 | Canola | cytosol | 28.44 | 27.11 |
| CDY29993 | Canola | cytosol | 26.07 | 26.74 |
| CDY21132 | Canola | cytosol | 25.75 | 26.63 |
| CDY63290 | Canola | cytosol | 19.75 | 24.9 |
| CDY22883 | Canola | cytosol | 25.28 | 24.5 |
| CDY40661 | Canola | cytosol | 29.38 | 24.41 |
| CDY27938 | Canola | cytosol | 16.43 | 23.69 |
| CDY44167 | Canola | cytosol | 17.85 | 22.97 |
| CDX82703 | Canola | cytosol | 33.49 | 21.97 |
| CDY44574 | Canola | cytosol | 16.59 | 21.78 |
| CDY36353 | Canola | plastid | 10.11 | 20.51 |
| KRG95394 | Soybean | nucleus | 16.75 | 18.69 |
| CDY60784 | Canola | cytosol | 9.79 | 18.45 |
| KRH67075 | Soybean | nucleus | 16.59 | 18.42 |
Protein Annotations
| EnsemblPlants:CDY22052 | EnsemblPlantsGene:GSBRNA2T00018430001 | Gene3D:2.60.40.790 | GO:A0A078GAK8 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0047134 | InterPro:DC1 | InterPro:HSP20-like_chaperone | InterPro:IPR008978 | PFAM:PF03107 | ProteinID:CDY22052 |
| ProteinID:CDY22052.1 | SEG:seg | SUPFAM:SSF49764 | SUPFAM:SSF57889 | UniParc:UPI0004EEC01A | UniProt:A0A078GAK8 |
| MapMan:19.1.6.2 | : | : | : | : | : |
Description
BnaA09g00810DBnaA09g00810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAK8]
Coordinates
chrLK032127:-:358701..362292
Molecular Weight (calculated)
72272.4 Da
IEP (calculated)
6.280
GRAVY (calculated)
-0.626
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFEGGVLLP LFHEHPMMPW NDHHMRKGDC CDYFEPQSDG YYCKLCDFFV HKKCGDELSE FLSDHPSHPN HTLRLQEKRG NVCDLCGSQI QNLSYYCDVC
101: DFDLDLHCVK YPPPDVIDNF EMHPHKLTLV KKQTFFECSS KCGKTSGHTF GFTIGNTSGL SYGLSYKCDE CCLSFFHVEC VWHPAAIDHQ PEVNHPYHSL
201: HPLKLFKGPP PDYSDGKCRL CGRNVDKELF YHCSSCNFTL DWRCVVNPPP QSLMDLKAHD HQLTLLPRLD SFTCNACGLK GERSPYICVP CGFMIHQECL
301: KLPRVININR HDHRVSRTSV LGDAAMNSVC GVCRKKVDWK YGGFSCKRCP SYVVHSKCAT REDVWNRKEL EGIPEEEGEE DIEPYVVIDD NTIQHFSHKD
401: HHLRLHGNNI LYEDNKRCSA CTHPIGLHSF YRCMDCDFSL HQNCAKCPKK KRHVLHYERL TLVTNKDLKV FRCDACYRRS NGFMYKHGGK ERSRNMQWLQ
501: NSKEDYLTVV ADSKETKVNL DPEGVFDFSA KAGPENHVYE LKLELHSKVN VEESKINIGV DEDDEGNDGA ADMDMGGMSG MDFSNFGGMG LGGMGGMEEF
601: EDSDDEEFAK PGDKKDEAVK EEAKPVGVLK EDK
101: DFDLDLHCVK YPPPDVIDNF EMHPHKLTLV KKQTFFECSS KCGKTSGHTF GFTIGNTSGL SYGLSYKCDE CCLSFFHVEC VWHPAAIDHQ PEVNHPYHSL
201: HPLKLFKGPP PDYSDGKCRL CGRNVDKELF YHCSSCNFTL DWRCVVNPPP QSLMDLKAHD HQLTLLPRLD SFTCNACGLK GERSPYICVP CGFMIHQECL
301: KLPRVININR HDHRVSRTSV LGDAAMNSVC GVCRKKVDWK YGGFSCKRCP SYVVHSKCAT REDVWNRKEL EGIPEEEGEE DIEPYVVIDD NTIQHFSHKD
401: HHLRLHGNNI LYEDNKRCSA CTHPIGLHSF YRCMDCDFSL HQNCAKCPKK KRHVLHYERL TLVTNKDLKV FRCDACYRRS NGFMYKHGGK ERSRNMQWLQ
501: NSKEDYLTVV ADSKETKVNL DPEGVFDFSA KAGPENHVYE LKLELHSKVN VEESKINIGV DEDDEGNDGA ADMDMGGMSG MDFSNFGGMG LGGMGGMEEF
601: EDSDDEEFAK PGDKKDEAVK EEAKPVGVLK EDK
001: MDSKGVVSLP LIHNHQMMPW NDLRKGDCCG HFEAISDGYY CKRCDFFVHK TCGDGVSEYI EHPSHPNHTL ELCSNLRFHC DLCGRRTNYL SYYCEICGFI
101: VDLHCAMYPP PEFIENSERH HHKLTLLKER IAAFDCDAKC GKISGNEFAY KCQECDLTFH VDCVWHPSEV YHPLEVNHSY HPSHPLKLHT GQRPDYSDGA
201: CRLCARKIDD RYFYHCSSCN FTLDMRCVLH PPQQSLLNLK AHDHQLTLLP RLDSFTCNAC GLKGDRSPYV CFQCGFMIHQ DCLSLPRLIN INRHDHRVSR
301: TSVLGVVNSV CEVCHRKVDW TCGGFSCQRC SGYVVHSKCA TNKDVWNGKE LEGVPEETED IKPFVVIDNN TIQHFSHKKH YLRLHVNGVL CDDKKRCRAC
401: THPICLQSFY GCMDCDFILH QNCAGFPRKR WHVLHNERLT LVSYEYDFFQ CQACNRFSNG FSYQYSGITF DVGCGSISEP FVHPSHPDHP LYYTLLDEET
501: KSSCNGCNKS SYSVLRCIED DCRFAICFKC ATFPQVVKHR VDDHPLSLCF DKEASGKYWC DICEKETNPE TWFYTCKDYR ASLHIKCVLG DFSWLMPGST
601: IDLSELSKVV LNNSISRPFC SGCKMHCIFP IILKIVGTSD KYFCSIECAF G
101: VDLHCAMYPP PEFIENSERH HHKLTLLKER IAAFDCDAKC GKISGNEFAY KCQECDLTFH VDCVWHPSEV YHPLEVNHSY HPSHPLKLHT GQRPDYSDGA
201: CRLCARKIDD RYFYHCSSCN FTLDMRCVLH PPQQSLLNLK AHDHQLTLLP RLDSFTCNAC GLKGDRSPYV CFQCGFMIHQ DCLSLPRLIN INRHDHRVSR
301: TSVLGVVNSV CEVCHRKVDW TCGGFSCQRC SGYVVHSKCA TNKDVWNGKE LEGVPEETED IKPFVVIDNN TIQHFSHKKH YLRLHVNGVL CDDKKRCRAC
401: THPICLQSFY GCMDCDFILH QNCAGFPRKR WHVLHNERLT LVSYEYDFFQ CQACNRFSNG FSYQYSGITF DVGCGSISEP FVHPSHPDHP LYYTLLDEET
501: KSSCNGCNKS SYSVLRCIED DCRFAICFKC ATFPQVVKHR VDDHPLSLCF DKEASGKYWC DICEKETNPE TWFYTCKDYR ASLHIKCVLG DFSWLMPGST
601: IDLSELSKVV LNNSISRPFC SGCKMHCIFP IILKIVGTSD KYFCSIECAF G
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SYI8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.