Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46828 | Canola | nucleus | 99.14 | 98.29 |
| CDX81261 | Canola | nucleus | 86.21 | 86.21 |
| CDY14517 | Canola | nucleus | 85.34 | 85.34 |
| CDY08844 | Canola | nucleus | 84.48 | 84.48 |
| AT5G64850.1 | Thale cress | nucleus | 77.59 | 78.95 |
| CDX69874 | Canola | nucleus | 68.97 | 71.43 |
| CDY21617 | Canola | nucleus | 68.97 | 70.8 |
| CDY40070 | Canola | nucleus | 67.24 | 69.03 |
| CDX85786 | Canola | nucleus | 66.38 | 68.14 |
| Bra031897.1-P | Field mustard | cytosol | 88.79 | 67.32 |
| Solyc04g051820.2.1 | Tomato | nucleus | 54.31 | 64.29 |
| CDY18692 | Canola | nucleus | 75.86 | 62.41 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 51.72 | 61.22 |
| KRH53801 | Soybean | nucleus | 52.59 | 59.8 |
| Solyc05g051710.2.1 | Tomato | nucleus | 52.59 | 59.22 |
| Solyc04g011910.2.1 | Tomato | nucleus | 48.28 | 58.33 |
| KRH43319 | Soybean | nucleus | 45.69 | 55.21 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 46.55 | 54.0 |
| PGSC0003DMT400077395 | Potato | nucleus | 49.14 | 53.77 |
| PGSC0003DMT400042668 | Potato | nucleus | 45.69 | 51.96 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 27.59 | 47.06 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 26.72 | 45.59 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 25.0 | 42.65 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 36.21 | 41.18 |
| KXG38577 | Sorghum | cytosol | 39.66 | 40.35 |
| Zm00001d027851_P001 | Maize | cytosol | 37.07 | 40.19 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 40.52 | 39.83 |
| KRH59453 | Soybean | cytosol | 43.97 | 39.53 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 37.93 | 37.93 |
| Zm00001d014200_P001 | Maize | nucleus | 38.79 | 37.19 |
| Zm00001d033003_P001 | Maize | cytosol | 37.07 | 37.07 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 37.93 | 36.97 |
| Os10t0405300-01 | Rice | plasma membrane | 37.07 | 36.44 |
| Os03t0169900-01 | Rice | cytosol | 36.21 | 36.21 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 36.21 | 34.43 |
| Zm00001d048317_P001 | Maize | cytosol | 36.21 | 34.15 |
| GSMUA_Achr10P... | Banana | nucleus | 36.21 | 32.81 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 31.03 | 32.73 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 30.17 | 29.41 |
| KRH15631 | Soybean | plastid | 42.24 | 28.32 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 28.45 | 27.97 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 34.48 | 27.03 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 29.31 | 26.77 |
Protein Annotations
| EnsemblPlants:CDY31298 | EnsemblPlantsGene:GSBRNA2T00047465001 | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 | ProteinID:CDY31298 | ProteinID:CDY31298.1 |
| UniParc:UPI0004EDFBBC | UniProt:A0A078H366 | MapMan:35.2 | : | : | : |
Description
BnaA02g34430DBnaA02g34430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H366]
Coordinates
chrLK032270:-:90606..92425
Molecular Weight (calculated)
13439.6 Da
IEP (calculated)
8.911
GRAVY (calculated)
-1.232
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDQKENKNS PWLSVPQFGD WDQKGGPVPD YSMDFSKIRE MRKQHKRDPS RASLGNEQDF INPFHNQPTS VDKTKAKLTT VHSDNNITNN EFPHHQRHPP
101: STRRGIFSCF NCCVKA
101: STRRGIFSCF NCCVKA
001: MEDRKENKNS PWLSVPQFGD WDQKGGSIDY SMDFSKIREM RKLNKRDASR ASLGNEEELI NPFHDQPPVD TAKPKKLTTV HSDNNNRNEF SHHHPHSPSR
101: RRRIFSCFNC CVKA
101: RRRIFSCFNC CVKA
Arabidopsis Description
At5g64850 [Source:UniProtKB/TrEMBL;Acc:Q0WN19]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.