Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042668 | Potato | nucleus | 87.76 | 84.31 |
| KRH53801 | Soybean | nucleus | 68.37 | 65.69 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 65.31 | 65.31 |
| KRH43319 | Soybean | nucleus | 62.24 | 63.54 |
| Solyc05g051710.2.1 | Tomato | nucleus | 64.29 | 61.16 |
| AT5G09960.1 | Thale cress | nucleus | 68.37 | 59.82 |
| CDX69874 | Canola | nucleus | 67.35 | 58.93 |
| CDY40070 | Canola | nucleus | 67.35 | 58.41 |
| CDY21617 | Canola | nucleus | 67.35 | 58.41 |
| Solyc04g011910.2.1 | Tomato | nucleus | 57.14 | 58.33 |
| CDX85786 | Canola | nucleus | 66.33 | 57.52 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 58.16 | 57.0 |
| Bra028607.1-P | Field mustard | nucleus | 64.29 | 55.75 |
| AT5G64850.1 | Thale cress | nucleus | 64.29 | 55.26 |
| CDX81261 | Canola | nucleus | 65.31 | 55.17 |
| CDY08844 | Canola | nucleus | 65.31 | 55.17 |
| CDY14517 | Canola | nucleus | 65.31 | 55.17 |
| CDY31298 | Canola | nucleus | 64.29 | 54.31 |
| CDY46828 | Canola | nucleus | 64.29 | 53.85 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 33.67 | 48.53 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 32.65 | 47.06 |
| KRH59453 | Soybean | cytosol | 60.2 | 45.74 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 30.61 | 44.12 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 48.98 | 41.38 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 48.98 | 40.68 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 48.98 | 40.34 |
| Zm00001d027851_P001 | Maize | cytosol | 43.88 | 40.19 |
| Bra037798.1-P | Field mustard | nucleus | 57.14 | 39.72 |
| Bra024332.1-P | Field mustard | cytosol | 36.73 | 39.56 |
| KXG38577 | Sorghum | cytosol | 45.92 | 39.47 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 40.82 | 39.22 |
| CDY18692 | Canola | nucleus | 56.12 | 39.01 |
| Os03t0169900-01 | Rice | cytosol | 44.9 | 37.93 |
| Os10t0405300-01 | Rice | plasma membrane | 44.9 | 37.29 |
| Zm00001d033003_P001 | Maize | cytosol | 43.88 | 37.07 |
| Zm00001d048317_P001 | Maize | cytosol | 44.9 | 35.77 |
| Bra031897.1-P | Field mustard | cytosol | 55.1 | 35.29 |
| GSMUA_Achr10P... | Banana | nucleus | 45.92 | 35.16 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 42.86 | 34.43 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 39.8 | 32.77 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 35.71 | 31.82 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 37.76 | 31.36 |
| Zm00001d014200_P001 | Maize | nucleus | 37.76 | 30.58 |
| KRH15631 | Soybean | plastid | 51.02 | 28.9 |
| Bra009071.1-P | Field mustard | nucleus | 67.35 | 27.73 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 35.71 | 27.56 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 40.82 | 27.03 |
Protein Annotations
| EnsemblPlants:Solyc04g051820.2.1 | EnsemblPlantsGene:Solyc04g051820.2 | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 | UniParc:UPI0002767369 | UniProt:K4BSD9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:51131564..51134935
Molecular Weight (calculated)
11317.1 Da
IEP (calculated)
8.747
GRAVY (calculated)
-1.058
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MDDRKEKTAP WLSVPQFGDW DQKGVMPDYS MDFSKIRENR KQNKSRASLG NEEELISTAN SKSNTVHSAR SDDLQFHQTH PSTTRRSIFS YFNCCVKA
001: MEDDRKEKNT PWLSVPQFGD WDQKGGGTMP DYSMDFTKIR EMRKQNKRDP SRASLGNEEE LIKPPESATS TAELTTVQSE NQREFSPSHH HQPHSPSTRR
101: SMFSCFNCCV KA
101: SMFSCFNCCV KA
Arabidopsis Description
At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.