Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G059370.1 | Barley | cytosol | 40.68 | 70.59 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 37.29 | 64.71 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 36.44 | 63.24 |
| Os03t0169900-01 | Rice | cytosol | 43.22 | 43.97 |
| Zm00001d027851_P001 | Maize | cytosol | 39.83 | 43.93 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 40.68 | 43.64 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 42.37 | 43.1 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 44.07 | 42.62 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 42.37 | 42.37 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 42.37 | 42.02 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 41.53 | 41.18 |
| Zm00001d048317_P001 | Maize | cytosol | 42.37 | 40.65 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 43.22 | 40.16 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 33.05 | 38.24 |
| Solyc04g051820.2.1 | Tomato | nucleus | 31.36 | 37.76 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 30.51 | 36.73 |
| PGSC0003DMT400042668 | Potato | nucleus | 30.51 | 35.29 |
| Solyc04g011910.2.1 | Tomato | nucleus | 27.97 | 34.38 |
| KRH43319 | Soybean | nucleus | 27.97 | 34.38 |
| KRH53801 | Soybean | nucleus | 29.66 | 34.31 |
| AT5G09960.1 | Thale cress | nucleus | 31.36 | 33.04 |
| CDX69874 | Canola | nucleus | 30.51 | 32.14 |
| PGSC0003DMT400077395 | Potato | nucleus | 28.81 | 32.08 |
| GSMUA_Achr10P... | Banana | nucleus | 34.75 | 32.03 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 27.12 | 32.0 |
| CDX85786 | Canola | nucleus | 30.51 | 31.86 |
| CDY21617 | Canola | nucleus | 30.51 | 31.86 |
| CDY40070 | Canola | nucleus | 30.51 | 31.86 |
| Solyc05g051710.2.1 | Tomato | nucleus | 27.12 | 31.07 |
| Bra028607.1-P | Field mustard | nucleus | 29.66 | 30.97 |
| Bra024332.1-P | Field mustard | cytosol | 22.88 | 29.67 |
| CDX81261 | Canola | nucleus | 28.81 | 29.31 |
| CDY14517 | Canola | nucleus | 28.81 | 29.31 |
| CDY08844 | Canola | nucleus | 27.97 | 28.45 |
| CDY31298 | Canola | nucleus | 27.97 | 28.45 |
| CDY46828 | Canola | nucleus | 27.97 | 28.21 |
| AT5G64850.1 | Thale cress | nucleus | 27.12 | 28.07 |
| KRH59453 | Soybean | cytosol | 28.81 | 26.36 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 33.05 | 26.35 |
| CDY18692 | Canola | nucleus | 27.97 | 23.4 |
| Bra037798.1-P | Field mustard | nucleus | 27.97 | 23.4 |
| Bra031897.1-P | Field mustard | cytosol | 27.12 | 20.91 |
| KRH15631 | Soybean | plastid | 27.97 | 19.08 |
| Bra009071.1-P | Field mustard | nucleus | 31.36 | 15.55 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G071050.2 | EnsemblPlantsGene:HORVU1Hr1G071050 | InterPro:TypeIII_avirulence_cleave | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF1 | PFAM:PF05627 |
| SEG:seg | UniParc:UPI000B4841E1 | UniProt:A0A287G502 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:492087980..492088336
Molecular Weight (calculated)
13143.1 Da
IEP (calculated)
7.084
GRAVY (calculated)
-0.896
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSDRCVRV CVCRGGTTTW MTVPAFGDWD MKNGAMPDYS MDFSKIREMH KQNKKELSRT SLSGDDRRPK RPAAAAYDYE ADPCWADYWS QMSSSRRTSS
101: PAPTSSCTSA ASSTTDSS
101: PAPTSSCTSA ASSTTDSS
001: MMHRFKNTPW LSVPQFGDWD QKGGGTMPDY SMDFTKIREM RKQNKRDPSR ASLGNEEELI KPPESATSTA ELTTVQSENQ REFSPSHHHQ PHSPSTRRSM
101: FSCFNCCVKA
101: FSCFNCCVKA
Arabidopsis Description
At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.