Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21617 | Canola | nucleus | 100.0 | 99.11 |
| AT5G09960.1 | Thale cress | nucleus | 88.39 | 88.39 |
| CDY40070 | Canola | nucleus | 87.5 | 86.73 |
| CDX85786 | Canola | nucleus | 86.61 | 85.84 |
| CDX81261 | Canola | nucleus | 74.11 | 71.55 |
| CDY08844 | Canola | nucleus | 74.11 | 71.55 |
| CDY14517 | Canola | nucleus | 74.11 | 71.55 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 60.71 | 69.39 |
| CDY31298 | Canola | nucleus | 71.43 | 68.97 |
| CDY46828 | Canola | nucleus | 71.43 | 68.38 |
| Solyc04g051820.2.1 | Tomato | nucleus | 58.93 | 67.35 |
| KRH53801 | Soybean | nucleus | 58.93 | 64.71 |
| Solyc04g011910.2.1 | Tomato | nucleus | 50.89 | 59.38 |
| Solyc05g051710.2.1 | Tomato | nucleus | 54.46 | 59.22 |
| KRH43319 | Soybean | nucleus | 49.11 | 57.29 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 50.89 | 57.0 |
| PGSC0003DMT400042668 | Potato | nucleus | 50.0 | 54.9 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 31.25 | 51.47 |
| PGSC0003DMT400077395 | Potato | nucleus | 48.21 | 50.94 |
| CDY18692 | Canola | nucleus | 62.5 | 49.65 |
| Bra009071.1-P | Field mustard | nucleus | 100.0 | 47.06 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 28.57 | 47.06 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 28.57 | 47.06 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 41.96 | 46.08 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 43.75 | 41.53 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 42.86 | 41.38 |
| Zm00001d027851_P001 | Maize | cytosol | 39.29 | 41.12 |
| KRH59453 | Soybean | cytosol | 47.32 | 41.09 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 41.96 | 39.5 |
| KXG38577 | Sorghum | cytosol | 40.18 | 39.47 |
| Os10t0405300-01 | Rice | plasma membrane | 40.18 | 38.14 |
| Os03t0169900-01 | Rice | cytosol | 39.29 | 37.93 |
| GSMUA_Achr10P... | Banana | nucleus | 42.86 | 37.5 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 40.18 | 36.89 |
| Zm00001d033003_P001 | Maize | cytosol | 37.5 | 36.21 |
| Zm00001d048317_P001 | Maize | cytosol | 39.29 | 35.77 |
| Zm00001d014200_P001 | Maize | nucleus | 37.5 | 34.71 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 32.14 | 32.73 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 33.04 | 31.09 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 32.14 | 30.51 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 40.18 | 30.41 |
| KRH15631 | Soybean | plastid | 46.43 | 30.06 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 33.93 | 29.92 |
Protein Annotations
| EnsemblPlants:CDX69874 | EnsemblPlantsGene:GSBRNA2T00135940001 | InterPro:TypeIII_avirulence_cleave | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 | PFAM:PF05627 |
| ProteinID:CDX69874 | ProteinID:CDX69874.1 | SEG:seg | UniParc:UPI0004EEC539 | MapMan:35.2 | : |
Description
BnaA10g22230D
Coordinates
chrLK031790:-:2196606..2197837
Molecular Weight (calculated)
12762.8 Da
IEP (calculated)
8.122
GRAVY (calculated)
-1.134
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDDRKEKNS PWLSVPQFGD WDQKGGGTIP DYSMDFTKIR EMRKQNKRDP SRASLGNEDE LVKPPESATA TAKLTTVHSE NQHHFSPAHH HQPHSPSTRR
101: SIFSCFNCCV KA
101: SIFSCFNCCV KA
001: MEDDRKEKNT PWLSVPQFGD WDQKGGGTMP DYSMDFTKIR EMRKQNKRDP SRASLGNEEE LIKPPESATS TAELTTVQSE NQREFSPSHH HQPHSPSTRR
101: SMFSCFNCCV KA
101: SMFSCFNCCV KA
Arabidopsis Description
At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.