CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53801	Soybean	nucleus	44.51	75.49
KRH64143	Soybean	cytosol, endoplasmic reticulum, nucleus	40.46	70.0
KRH43319	Soybean	nucleus	36.42	65.62
VIT_07s0031g01630.t01	Wine grape	nucleus	31.79	56.12
Solyc04g051820.2.1	Tomato	nucleus	28.9	51.02
KRH59453	Soybean	cytosol	37.57	50.39
PGSC0003DMT400042668	Potato	nucleus	28.9	49.02
HORVU2Hr1G087230.1	Barley	cytosol	19.08	48.53
Solyc04g011910.2.1	Tomato	nucleus	26.59	47.92
HORVU3Hr1G059370.1	Barley	cytosol	18.5	47.06
AT5G09960.1	Thale cress	nucleus	30.06	46.43
CDX69874	Canola	nucleus	30.06	46.43
CDY21617	Canola	nucleus	30.06	46.02
CDY40070	Canola	nucleus	30.06	46.02
CDX85786	Canola	nucleus	30.06	46.02
HORVU6Hr1G039070.1	Barley	cytosol	17.92	45.59
PGSC0003DMT400077395	Potato	nucleus	27.75	45.28
CDX81261	Canola	nucleus	30.06	44.83
Solyc05g051710.2.1	Tomato	nucleus	26.59	44.66
Bra028607.1-P	Field mustard	nucleus	28.9	44.25
CDY14517	Canola	nucleus	28.9	43.1
CDY08844	Canola	nucleus	28.9	43.1
AT5G64850.1	Thale cress	nucleus	28.32	42.98
CDY31298	Canola	nucleus	28.32	42.24
CDY46828	Canola	nucleus	28.32	41.88
GSMUA_Achr6P10580_001	Banana	nucleus	21.97	37.25
KXG38577	Sorghum	cytosol	24.28	36.84
Bra037798.1-P	Field mustard	nucleus	28.9	35.46
Bra024332.1-P	Field mustard	cytosol	18.5	35.16
CDY18692	Canola	nucleus	28.32	34.75
TraesCS4A01G017200.1	Wheat	nucleus	23.12	34.48
TraesCS4D01G285600.1	Wheat	nucleus	23.7	34.45
TraesCS4B01G286900.1	Wheat	nucleus	23.12	33.9
Os10t0405300-01	Rice	plasma membrane	23.12	33.9
Zm00001d027851_P001	Maize	cytosol	20.81	33.64
Zm00001d033003_P001	Maize	cytosol	22.54	33.62
Zm00001d014200_P001	Maize	nucleus	23.12	33.06
EER92785	Sorghum	cytosol, mitochondrion, nucleus	22.54	31.97
HORVU5Hr1G046790.1	Barley	cytosol	21.97	31.93
Os03t0169900-01	Rice	cytosol	21.39	31.9
HORVU2Hr1G071440.2	Barley	cytosol	19.65	30.91
Bra031897.1-P	Field mustard	cytosol	27.17	30.72
GSMUA_Achr10P...	Banana	nucleus	21.97	29.69
Zm00001d048317_P001	Maize	cytosol	20.23	28.46
HORVU1Hr1G071050.2	Barley	cytosol	19.08	27.97
HORVU0Hr1G012080.1	Barley	cytosol	20.23	27.56
GSMUA_Achr3P21420_001	Banana	nucleus	22.54	26.35
Bra009071.1-P	Field mustard	nucleus	34.68	25.21

Protein Annotations

EMBL:ACUP02008622	EnsemblPlants:KRH15631	EnsemblPlantsGene:GLYMA_14G100900	PANTHER:PTHR33882	PANTHER:PTHR33882:SF2	ProteinID:KRH15631
ProteinID:KRH15631.1	SEG:seg	UniParc:UPI000233B9D5	UniProt:K7M5Z8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr14:+:9991712..9993649

Molecular Weight (calculated)

19807.1 Da

IEP (calculated)

8.636

GRAVY (calculated)

-0.698

Length

173 amino acids

Sequence
(BLAST)

001: MVPKPSTLQP YSLTHSHGTS TPRSHSRSCS WCQSCSCSHS HLSTAEKIHA ATIVPIYHHF ISLANLSNFL SRSEITLMEQ SKEKNTTWLL VPQFRDWDQK
101: GQVPDYSFDF SKIREMRKQN NTNISRASLG NEEKLMASST TSNTSTIHSD DHQHPYYHQT NSPTIRSLSF LFY

Best Arabidopsis Sequence Match ( AT5G09960.1 )
(BLAST)

001: MEDDRKEKNT PWLSVPQFGD WDQKGGGTMP DYSMDFTKIR EMRKQNKRDP SRASLGNEEE LIKPPESATS TAELTTVQSE NQREFSPSHH HQPHSPSTRR
101: SMFSCFNCCV KA

Arabidopsis Description

At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.