Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037798.1-P | Field mustard | nucleus | 95.74 | 95.74 |
| CDX81261 | Canola | nucleus | 70.21 | 85.34 |
| CDY08844 | Canola | nucleus | 63.83 | 77.59 |
| CDY14517 | Canola | nucleus | 63.83 | 77.59 |
| AT5G64850.1 | Thale cress | nucleus | 61.7 | 76.32 |
| CDY31298 | Canola | nucleus | 62.41 | 75.86 |
| CDY46828 | Canola | nucleus | 61.7 | 74.36 |
| CDX69874 | Canola | nucleus | 49.65 | 62.5 |
| CDY21617 | Canola | nucleus | 49.65 | 61.95 |
| CDY40070 | Canola | nucleus | 48.94 | 61.06 |
| CDX85786 | Canola | nucleus | 48.23 | 60.18 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 39.01 | 56.12 |
| Solyc04g051820.2.1 | Tomato | nucleus | 39.01 | 56.12 |
| PGSC0003DMT400042668 | Potato | nucleus | 39.72 | 54.9 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 38.3 | 54.0 |
| KRH53801 | Soybean | nucleus | 39.01 | 53.92 |
| KRH43319 | Soybean | nucleus | 36.17 | 53.12 |
| Solyc04g011910.2.1 | Tomato | nucleus | 35.46 | 52.08 |
| PGSC0003DMT400077395 | Potato | nucleus | 39.01 | 51.89 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 24.11 | 50.0 |
| Solyc05g051710.2.1 | Tomato | nucleus | 35.46 | 48.54 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 22.7 | 47.06 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 21.99 | 45.59 |
| KRH59453 | Soybean | cytosol | 37.59 | 41.09 |
| KXG38577 | Sorghum | cytosol | 31.91 | 39.47 |
| Zm00001d027851_P001 | Maize | cytosol | 29.08 | 38.32 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 27.66 | 38.24 |
| Zm00001d033003_P001 | Maize | cytosol | 31.21 | 37.93 |
| Zm00001d014200_P001 | Maize | nucleus | 31.91 | 37.19 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 29.79 | 35.59 |
| Os10t0405300-01 | Rice | plasma membrane | 29.08 | 34.75 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 28.37 | 34.48 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 29.79 | 34.43 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 26.24 | 33.64 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 28.37 | 33.61 |
| GSMUA_Achr10P... | Banana | nucleus | 29.79 | 32.81 |
| Os03t0169900-01 | Rice | cytosol | 26.95 | 32.76 |
| Zm00001d048317_P001 | Maize | cytosol | 27.66 | 31.71 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 24.82 | 29.41 |
| KRH15631 | Soybean | plastid | 34.75 | 28.32 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 23.4 | 27.97 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 24.11 | 26.77 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 27.66 | 26.35 |
Protein Annotations
| EnsemblPlants:CDY18692 | EnsemblPlantsGene:GSBRNA2T00005769001 | InterPro:TypeIII_avirulence_cleave | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 | PFAM:PF05627 |
| ProteinID:CDY18692 | ProteinID:CDY18692.1 | SEG:seg | UniParc:UPI0004EF4A1D | UniProt:A0A078G119 | MapMan:35.2 |
Description
BnaA09g07030DBnaA09g07030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G119]
Coordinates
chrLK032087:-:544478..546101
Molecular Weight (calculated)
15890.3 Da
IEP (calculated)
6.968
GRAVY (calculated)
-1.088
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPKENKNS PWLSVPQFGD WDQKGGSIPD YSMDFSKIRE MRKQNKRDPS RASLGNEEEL INPFHNQPAS VDNTKPKLTT VHSDNNKTHN EFSHHHPHPP
101: SVGVFSLVMR GEESSAASTA ALKLEEMKNG NVATYYCGSR H
101: SVGVFSLVMR GEESSAASTA ALKLEEMKNG NVATYYCGSR H
001: MEDRKENKNS PWLSVPQFGD WDQKGGSIDY SMDFSKIREM RKLNKRDASR ASLGNEEELI NPFHDQPPVD TAKPKKLTTV HSDNNNRNEF SHHHPHSPSR
101: RRRIFSCFNC CVKA
101: RRRIFSCFNC CVKA
Arabidopsis Description
At5g64850 [Source:UniProtKB/TrEMBL;Acc:Q0WN19]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.