Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G087230.1 | Barley | cytosol | 44.88 | 83.82 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 43.31 | 80.88 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 40.94 | 76.47 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 63.78 | 68.07 |
| Zm00001d027851_P001 | Maize | cytosol | 41.73 | 49.53 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 44.09 | 47.46 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 43.31 | 47.41 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 44.09 | 47.06 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 40.16 | 46.36 |
| Os03t0169900-01 | Rice | cytosol | 40.16 | 43.97 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 40.16 | 43.22 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 39.37 | 40.98 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 31.5 | 39.22 |
| Zm00001d048317_P001 | Maize | cytosol | 37.8 | 39.02 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 27.56 | 35.71 |
| Solyc04g051820.2.1 | Tomato | nucleus | 27.56 | 35.71 |
| PGSC0003DMT400042668 | Potato | nucleus | 28.35 | 35.29 |
| KRH53801 | Soybean | nucleus | 28.35 | 35.29 |
| AT5G09960.1 | Thale cress | nucleus | 30.71 | 34.82 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 26.77 | 34.0 |
| PGSC0003DMT400077395 | Potato | nucleus | 28.35 | 33.96 |
| CDX69874 | Canola | nucleus | 29.92 | 33.93 |
| CDY21617 | Canola | nucleus | 29.92 | 33.63 |
| KRH43319 | Soybean | nucleus | 25.2 | 33.33 |
| Solyc04g011910.2.1 | Tomato | nucleus | 25.2 | 33.33 |
| Solyc05g051710.2.1 | Tomato | nucleus | 26.77 | 33.01 |
| CDY14517 | Canola | nucleus | 29.92 | 32.76 |
| GSMUA_Achr10P... | Banana | nucleus | 32.28 | 32.03 |
| CDY08844 | Canola | nucleus | 29.13 | 31.9 |
| CDX85786 | Canola | nucleus | 28.35 | 31.86 |
| CDY40070 | Canola | nucleus | 28.35 | 31.86 |
| Bra028607.1-P | Field mustard | nucleus | 28.35 | 31.86 |
| CDX81261 | Canola | nucleus | 27.56 | 30.17 |
| AT5G64850.1 | Thale cress | nucleus | 26.77 | 29.82 |
| CDY31298 | Canola | nucleus | 26.77 | 29.31 |
| CDY46828 | Canola | nucleus | 26.77 | 29.06 |
| Bra024332.1-P | Field mustard | cytosol | 20.47 | 28.57 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 30.71 | 26.35 |
| KRH59453 | Soybean | cytosol | 25.2 | 24.81 |
| Bra037798.1-P | Field mustard | nucleus | 26.77 | 24.11 |
| CDY18692 | Canola | nucleus | 26.77 | 24.11 |
| Bra031897.1-P | Field mustard | cytosol | 25.98 | 21.57 |
| KRH15631 | Soybean | plastid | 27.56 | 20.23 |
| Bra009071.1-P | Field mustard | nucleus | 29.92 | 15.97 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G012080.1 | EnsemblPlantsGene:HORVU0Hr1G012080 | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF1 | SEG:seg | UniParc:UPI000B473534 |
| UniProt:A0A287DZT8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:69236349..69236847
Molecular Weight (calculated)
14195.4 Da
IEP (calculated)
5.999
GRAVY (calculated)
-0.779
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: RREARELKGE GATTWMTVPA FSDWHMKNDA MPDYSMDFTK IREMHKQNKK ELSRASLSGD DDLLAHHEGP EVAAAEQEAK RAVAVAYDYA ADQRWADYWS
101: NVLVPLHLAA RPTSSPTSAT SSARDSS
101: NVLVPLHLAA RPTSSPTSAT SSARDSS
1: MPDYSMDFTK IREMRKQNKR DPSRASLGNE EELIKPPESA TSTAELTTVQ SENQREFSPS HHHQPHSPST RRSMFSCFNC CVKA
Arabidopsis Description
At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.