Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G059370.1 | Barley | cytosol | 43.1 | 73.53 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 41.38 | 70.59 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 38.79 | 66.18 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 66.38 | 64.71 |
| Zm00001d027851_P001 | Maize | cytosol | 58.62 | 63.55 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 63.79 | 62.71 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 65.52 | 62.3 |
| Os10t0405300-01 | Rice | plasma membrane | 61.21 | 60.17 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 59.48 | 59.48 |
| Zm00001d048317_P001 | Maize | cytosol | 60.34 | 56.91 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 45.69 | 51.96 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 47.41 | 50.0 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 41.38 | 48.98 |
| KRH53801 | Soybean | nucleus | 42.24 | 48.04 |
| Solyc04g011910.2.1 | Tomato | nucleus | 37.93 | 45.83 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 45.31 |
| Solyc04g051820.2.1 | Tomato | nucleus | 37.93 | 44.9 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 44.83 | 43.7 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 43.97 | 43.22 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 36.21 | 42.0 |
| KRH43319 | Soybean | nucleus | 33.62 | 40.62 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 43.97 | 40.16 |
| Solyc05g051710.2.1 | Tomato | nucleus | 35.34 | 39.81 |
| CDX69874 | Canola | nucleus | 37.93 | 39.29 |
| CDY21617 | Canola | nucleus | 37.93 | 38.94 |
| PGSC0003DMT400077395 | Potato | nucleus | 35.34 | 38.68 |
| CDX81261 | Canola | nucleus | 37.93 | 37.93 |
| CDY14517 | Canola | nucleus | 37.93 | 37.93 |
| AT5G64850.1 | Thale cress | nucleus | 37.07 | 37.72 |
| AT5G09960.1 | Thale cress | nucleus | 36.21 | 37.5 |
| PGSC0003DMT400042668 | Potato | nucleus | 32.76 | 37.25 |
| CDY08844 | Canola | nucleus | 37.07 | 37.07 |
| CDX85786 | Canola | nucleus | 35.34 | 36.28 |
| CDY40070 | Canola | nucleus | 35.34 | 36.28 |
| CDY31298 | Canola | nucleus | 36.21 | 36.21 |
| CDY46828 | Canola | nucleus | 36.21 | 35.9 |
| Bra028607.1-P | Field mustard | nucleus | 34.48 | 35.4 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 42.24 | 33.11 |
| Bra024332.1-P | Field mustard | cytosol | 24.14 | 30.77 |
| KRH59453 | Soybean | cytosol | 32.76 | 29.46 |
| Bra037798.1-P | Field mustard | nucleus | 33.62 | 27.66 |
| CDY18692 | Canola | nucleus | 32.76 | 26.95 |
| Bra031897.1-P | Field mustard | cytosol | 33.62 | 25.49 |
| KRH15631 | Soybean | plastid | 31.9 | 21.39 |
| Bra009071.1-P | Field mustard | nucleus | 37.93 | 18.49 |
Protein Annotations
| EnsemblPlants:Os03t0169900-01 | EnsemblPlantsGene:Os03g0169900 | InterPro:TypeIII_avirulence_cleave | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF1 | PFAM:PF05627 |
| ProteinID:BAF11018.1 | ProteinID:BAS82517.1 | SEG:seg | UniParc:UPI0000E11F43 | UniProt:Q0DUS0 | MapMan:35.2 |
Description
Pathogenic type III effector avirulence factor Avr cleavage site domain containing protein. (Os03t0169900-01)
Coordinates
chr3:-:3747934..3750271
Molecular Weight (calculated)
12959.3 Da
IEP (calculated)
10.584
GRAVY (calculated)
-1.106
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: GHGAAAAGGR NGWMTVPAFG DWDMKNGALP DYSMDFSKIR EMRKQNKKEL SRTSLGGDDD LLAQQKQQQP QPQQKPAKAN LGRPADDHRH RQLHGRHGSP
101: TGRRTFLSYF QCCIKA
101: TGRRTFLSYF QCCIKA
001: MMHRFKNTPW LSVPQFGDWD QKGGGTMPDY SMDFTKIREM RKQNKRDPSR ASLGNEEELI KPPESATSTA ELTTVQSENQ REFSPSHHHQ PHSPSTRRSM
101: FSCFNCCVKA
101: FSCFNCCVKA
Arabidopsis Description
At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.