Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18692 | Canola | nucleus | 95.74 | 95.74 |
| AT5G64850.1 | Thale cress | nucleus | 62.41 | 77.19 |
| Bra028607.1-P | Field mustard | nucleus | 47.52 | 59.29 |
| Bra031897.1-P | Field mustard | cytosol | 62.41 | 57.52 |
| Solyc04g051820.2.1 | Tomato | nucleus | 39.72 | 57.14 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 39.72 | 57.14 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 39.01 | 55.0 |
| PGSC0003DMT400042668 | Potato | nucleus | 39.72 | 54.9 |
| KRH53801 | Soybean | nucleus | 39.72 | 54.9 |
| KRH43319 | Soybean | nucleus | 36.88 | 54.17 |
| Solyc04g011910.2.1 | Tomato | nucleus | 35.46 | 52.08 |
| PGSC0003DMT400077395 | Potato | nucleus | 39.01 | 51.89 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 24.11 | 50.0 |
| Solyc05g051710.2.1 | Tomato | nucleus | 36.17 | 49.51 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 22.7 | 47.06 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 21.99 | 45.59 |
| Bra024332.1-P | Field mustard | cytosol | 27.66 | 42.86 |
| KRH59453 | Soybean | cytosol | 38.3 | 41.86 |
| KXG38577 | Sorghum | cytosol | 32.62 | 40.35 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 28.37 | 39.22 |
| Zm00001d033003_P001 | Maize | cytosol | 31.91 | 38.79 |
| Zm00001d027851_P001 | Maize | cytosol | 28.37 | 37.38 |
| Zm00001d014200_P001 | Maize | nucleus | 31.91 | 37.19 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 30.5 | 36.44 |
| Os10t0405300-01 | Rice | plasma membrane | 29.79 | 35.59 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 29.08 | 35.34 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 29.08 | 34.45 |
| Os03t0169900-01 | Rice | cytosol | 27.66 | 33.62 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 29.08 | 33.61 |
| GSMUA_Achr10P... | Banana | nucleus | 30.5 | 33.59 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 25.53 | 32.73 |
| Zm00001d048317_P001 | Maize | cytosol | 26.95 | 30.89 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 25.53 | 30.25 |
| Bra009071.1-P | Field mustard | nucleus | 50.35 | 29.83 |
| KRH15631 | Soybean | plastid | 35.46 | 28.9 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 23.4 | 27.97 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 28.37 | 27.03 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 24.11 | 26.77 |
Protein Annotations
| EnsemblPlants:Bra037798.1 | EnsemblPlants:Bra037798.1-P | EnsemblPlantsGene:Bra037798 | InterPro:TypeIII_avirulence_cleave | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 |
| PFAM:PF05627 | UniParc:UPI0002541B32 | UniProt:M4F9N5 | MapMan:35.2 | : | : |
Description
AT5G64850 (E=5e-044) | unknown protein
Coordinates
chrA09:+:3634087..3635452
Molecular Weight (calculated)
16053.5 Da
IEP (calculated)
7.296
GRAVY (calculated)
-1.187
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPKENKNS PWLSVPQFGD WDQKGGSIPD YSMDFSKIRE MRKQNKRDPS RASLGNEEEL INPFHNQPAS VDNTKPKLTT VHSDNNKTHN EFSHHHPHPP
101: SVRLWNLTLR GEESSAASTA ALKLEEMKNG NVATYYCGSR H
101: SVRLWNLTLR GEESSAASTA ALKLEEMKNG NVATYYCGSR H
001: MEDRKENKNS PWLSVPQFGD WDQKGGSIDY SMDFSKIREM RKLNKRDASR ASLGNEEELI NPFHDQPPVD TAKPKKLTTV HSDNNNRNEF SHHHPHSPSR
101: RRRIFSCFNC CVKA
101: RRRIFSCFNC CVKA
Arabidopsis Description
At5g64850 [Source:UniProtKB/TrEMBL;Acc:Q0WN19]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.