Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 60.42 | 59.18 |
| Solyc04g051820.2.1 | Tomato | nucleus | 58.33 | 57.14 |
| KRH53801 | Soybean | nucleus | 58.33 | 54.9 |
| CDX69874 | Canola | nucleus | 59.38 | 50.89 |
| CDY40070 | Canola | nucleus | 59.38 | 50.44 |
| CDY21617 | Canola | nucleus | 59.38 | 50.44 |
| CDX85786 | Canola | nucleus | 59.38 | 50.44 |
| Bra028607.1-P | Field mustard | nucleus | 59.38 | 50.44 |
| CDX81261 | Canola | nucleus | 60.42 | 50.0 |
| CDY14517 | Canola | nucleus | 60.42 | 50.0 |
| CDY08844 | Canola | nucleus | 59.38 | 49.14 |
| AT5G64850.1 | Thale cress | nucleus | 58.33 | 49.12 |
| AT5G09960.1 | Thale cress | nucleus | 57.29 | 49.11 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 34.38 | 48.53 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 34.38 | 48.53 |
| CDY31298 | Canola | nucleus | 58.33 | 48.28 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 50.0 | 48.0 |
| KRH43319 | Soybean | nucleus | 47.92 | 47.92 |
| CDY46828 | Canola | nucleus | 58.33 | 47.86 |
| Solyc05g051710.2.1 | Tomato | nucleus | 51.04 | 47.57 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 31.25 | 44.12 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 53.12 | 42.86 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 48.96 | 40.52 |
| Zm00001d027851_P001 | Maize | cytosol | 44.79 | 40.19 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 48.96 | 39.83 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 41.67 | 39.22 |
| Bra024332.1-P | Field mustard | cytosol | 36.46 | 38.46 |
| Os10t0405300-01 | Rice | plasma membrane | 46.88 | 38.14 |
| Os03t0169900-01 | Rice | cytosol | 45.83 | 37.93 |
| KRH59453 | Soybean | cytosol | 50.0 | 37.21 |
| KXG38577 | Sorghum | cytosol | 43.75 | 36.84 |
| Zm00001d033003_P001 | Maize | cytosol | 43.75 | 36.21 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 45.83 | 36.07 |
| Zm00001d048317_P001 | Maize | cytosol | 45.83 | 35.77 |
| CDY18692 | Canola | nucleus | 52.08 | 35.46 |
| Bra037798.1-P | Field mustard | nucleus | 52.08 | 35.46 |
| GSMUA_Achr10P... | Banana | nucleus | 44.79 | 33.59 |
| Zm00001d014200_P001 | Maize | nucleus | 41.67 | 33.06 |
| Bra031897.1-P | Field mustard | cytosol | 52.08 | 32.68 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 35.42 | 30.91 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 35.42 | 28.57 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 34.38 | 27.97 |
| KRH15631 | Soybean | plastid | 47.92 | 26.59 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 33.33 | 25.2 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 38.54 | 25.0 |
| Bra009071.1-P | Field mustard | nucleus | 59.38 | 23.95 |
Protein Annotations
| EnsemblPlants:Solyc04g011910.2.1 | EnsemblPlantsGene:Solyc04g011910.2 | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 | UniParc:UPI00027661EE | UniProt:K4BPP4 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:4291763..4293737
Molecular Weight (calculated)
11536.4 Da
IEP (calculated)
9.706
GRAVY (calculated)
-1.405
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MEYHKEKKNG PWLSVPQFGH WDQKGVYPDY SMDFSKIREN RKQNKKDLSR ASFGNENDLI FSTKSDANEN DHHYHQNQST TRMRRIFRYF NCCGKA
001: MEDRKENKNS PWLSVPQFGD WDQKGGSIDY SMDFSKIREM RKLNKRDASR ASLGNEEELI NPFHDQPPVD TAKPKKLTTV HSDNNNRNEF SHHHPHSPSR
101: RRRIFSCFNC CVKA
101: RRRIFSCFNC CVKA
Arabidopsis Description
At5g64850 [Source:UniProtKB/TrEMBL;Acc:Q0WN19]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.