CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64143	Soybean	cytosol, endoplasmic reticulum, nucleus	79.41	81.0
KRH43319	Soybean	nucleus	71.57	76.04
VIT_07s0031g01630.t01	Wine grape	nucleus	67.65	70.41
Solyc04g051820.2.1	Tomato	nucleus	65.69	68.37
CDX69874	Canola	nucleus	64.71	58.93
CDY21617	Canola	nucleus	64.71	58.41
Solyc04g011910.2.1	Tomato	nucleus	54.9	58.33
AT5G09960.1	Thale cress	nucleus	63.73	58.04
CDX85786	Canola	nucleus	63.73	57.52
CDY40070	Canola	nucleus	63.73	57.52
PGSC0003DMT400042668	Potato	nucleus	56.86	56.86
Bra028607.1-P	Field mustard	nucleus	61.76	55.75
Solyc05g051710.2.1	Tomato	nucleus	55.88	55.34
CDX81261	Canola	nucleus	62.75	55.17
KRH59453	Soybean	cytosol	68.63	54.26
AT5G64850.1	Thale cress	nucleus	59.8	53.51
CDY14517	Canola	nucleus	60.78	53.45
CDY08844	Canola	nucleus	60.78	53.45
CDY31298	Canola	nucleus	59.8	52.59
CDY46828	Canola	nucleus	59.8	52.14
PGSC0003DMT400077395	Potato	nucleus	53.92	51.89
HORVU2Hr1G087230.1	Barley	cytosol	33.33	50.0
KXG38577	Sorghum	cytosol	52.94	47.37
HORVU3Hr1G059370.1	Barley	cytosol	31.37	47.06
GSMUA_Achr6P10580_001	Banana	nucleus	46.08	46.08
HORVU6Hr1G039070.1	Barley	cytosol	30.39	45.59
Zm00001d027851_P001	Maize	cytosol	47.06	44.86
KRH15631	Soybean	plastid	75.49	44.51
TraesCS4A01G017200.1	Wheat	nucleus	50.0	43.97
TraesCS4D01G285600.1	Wheat	nucleus	50.98	43.7
TraesCS4B01G286900.1	Wheat	nucleus	50.0	43.22
Zm00001d033003_P001	Maize	cytosol	49.02	43.1
Os10t0405300-01	Rice	plasma membrane	49.02	42.37
Os03t0169900-01	Rice	cytosol	48.04	42.24
EER92785	Sorghum	cytosol, mitochondrion, nucleus	50.0	41.8
Bra037798.1-P	Field mustard	nucleus	54.9	39.72
CDY18692	Canola	nucleus	53.92	39.01
Zm00001d048317_P001	Maize	cytosol	46.08	38.21
Bra024332.1-P	Field mustard	cytosol	33.33	37.36
GSMUA_Achr10P...	Banana	nucleus	46.08	36.72
Bra031897.1-P	Field mustard	cytosol	54.9	36.6
Zm00001d014200_P001	Maize	nucleus	41.18	34.71
HORVU5Hr1G046790.1	Barley	cytosol	38.24	32.77
HORVU2Hr1G071440.2	Barley	cytosol	34.31	31.82
GSMUA_Achr3P21420_001	Banana	nucleus	43.14	29.73
HORVU1Hr1G071050.2	Barley	cytosol	34.31	29.66
HORVU0Hr1G012080.1	Barley	cytosol	35.29	28.35
Bra009071.1-P	Field mustard	nucleus	64.71	27.73

Protein Annotations

EMBL:ACUP02003486	EnsemblPlants:KRH53801	EnsemblPlantsGene:GLYMA_06G146800	PANTHER:PTHR33882	PANTHER:PTHR33882:SF2	ProteinID:KRH53801
ProteinID:KRH53801.1	UniParc:UPI000233A163	UniProt:I1KBC1	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr6:-:11966736..11969923

Molecular Weight (calculated)

11762.5 Da

IEP (calculated)

7.629

GRAVY (calculated)

-1.123

Length

102 amino acids

Sequence
(BLAST)

001: MEQSKEKNAP WLSVPQFGDW DQKGQVPDYS LDFSKIREMR KQNKTNISRA SLGNEEELMA SSATNNTSTV HSDDHQHPHY HQTNSPTTRR SFLSYFNCCI
101: KA

Best Arabidopsis Sequence Match ( AT5G09960.1 )
(BLAST)

001: MEDDRKEKNT PWLSVPQFGD WDQKGGGTMP DYSMDFTKIR EMRKQNKRDP SRASLGNEEE LIKPPESATS TAELTTVQSE NQREFSPSHH HQPHSPSTRR
101: SMFSCFNCCV KA

Arabidopsis Description

At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.