Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81261 | Canola | nucleus | 85.96 | 84.48 |
| CDY14517 | Canola | nucleus | 83.33 | 81.9 |
| CDY08844 | Canola | nucleus | 82.46 | 81.03 |
| CDY31298 | Canola | nucleus | 78.95 | 77.59 |
| CDY46828 | Canola | nucleus | 78.07 | 76.07 |
| AT5G09960.1 | Thale cress | nucleus | 65.79 | 66.96 |
| Solyc04g051820.2.1 | Tomato | nucleus | 55.26 | 64.29 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 54.39 | 63.27 |
| Bra037798.1-P | Field mustard | nucleus | 77.19 | 62.41 |
| CDY18692 | Canola | nucleus | 76.32 | 61.7 |
| KRH53801 | Soybean | nucleus | 53.51 | 59.8 |
| Solyc04g011910.2.1 | Tomato | nucleus | 49.12 | 58.33 |
| Solyc05g051710.2.1 | Tomato | nucleus | 52.63 | 58.25 |
| KRH43319 | Soybean | nucleus | 46.49 | 55.21 |
| PGSC0003DMT400077395 | Potato | nucleus | 50.88 | 54.72 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 47.37 | 54.0 |
| PGSC0003DMT400042668 | Potato | nucleus | 47.37 | 52.94 |
| Bra031897.1-P | Field mustard | cytosol | 70.18 | 52.29 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 28.07 | 47.06 |
| Bra024332.1-P | Field mustard | cytosol | 35.96 | 45.05 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 26.32 | 44.12 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 25.44 | 42.65 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 37.72 | 42.16 |
| KXG38577 | Sorghum | cytosol | 41.23 | 41.23 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 42.11 | 40.68 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 40.35 | 39.66 |
| KRH59453 | Soybean | cytosol | 44.74 | 39.53 |
| Zm00001d027851_P001 | Maize | cytosol | 36.84 | 39.25 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 40.35 | 38.66 |
| Zm00001d014200_P001 | Maize | nucleus | 40.35 | 38.02 |
| Zm00001d033003_P001 | Maize | cytosol | 38.6 | 37.93 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 40.35 | 37.7 |
| Os10t0405300-01 | Rice | plasma membrane | 38.6 | 37.29 |
| Os03t0169900-01 | Rice | cytosol | 37.72 | 37.07 |
| GSMUA_Achr10P... | Banana | nucleus | 38.6 | 34.38 |
| Zm00001d048317_P001 | Maize | cytosol | 36.84 | 34.15 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 30.7 | 31.82 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 30.7 | 29.41 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 36.84 | 28.38 |
| KRH15631 | Soybean | plastid | 42.98 | 28.32 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 28.07 | 27.12 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 29.82 | 26.77 |
Protein Annotations
| MapMan:35.2 | EntrezGene:836608 | UniProt:A0A178UD07 | ProteinID:AED97961.1 | EMBL:AK229636 | ArrayExpress:AT5G64850 |
| EnsemblPlantsGene:AT5G64850 | RefSeq:AT5G64850 | TAIR:AT5G64850 | RefSeq:AT5G64850-TAIR-G | EnsemblPlants:AT5G64850.1 | TAIR:AT5G64850.1 |
| Unigene:At.28935 | EMBL:BT028877 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 |
| GO:GO:0016020 | RefSeq:NP_568998.1 | ProteinID:OAO91575.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 | UniProt:Q0WN19 |
| UniParc:UPI0000162938 | SEG:seg | : | : | : | : |
Description
At5g64850 [Source:UniProtKB/TrEMBL;Acc:Q0WN19]
Coordinates
chr5:+:25921402..25923418
Molecular Weight (calculated)
13324.5 Da
IEP (calculated)
9.364
GRAVY (calculated)
-1.254
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDRKENKNS PWLSVPQFGD WDQKGGSIDY SMDFSKIREM RKLNKRDASR ASLGNEEELI NPFHDQPPVD TAKPKKLTTV HSDNNNRNEF SHHHPHSPSR
101: RRRIFSCFNC CVKA
101: RRRIFSCFNC CVKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.