Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69874 | Canola | nucleus | 99.11 | 100.0 |
| AT5G09960.1 | Thale cress | nucleus | 87.61 | 88.39 |
| CDY40070 | Canola | nucleus | 86.73 | 86.73 |
| CDX85786 | Canola | nucleus | 85.84 | 85.84 |
| CDX81261 | Canola | nucleus | 73.45 | 71.55 |
| CDY08844 | Canola | nucleus | 73.45 | 71.55 |
| CDY14517 | Canola | nucleus | 73.45 | 71.55 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 60.18 | 69.39 |
| CDY31298 | Canola | nucleus | 70.8 | 68.97 |
| CDY46828 | Canola | nucleus | 70.8 | 68.38 |
| Solyc04g051820.2.1 | Tomato | nucleus | 58.41 | 67.35 |
| KRH53801 | Soybean | nucleus | 58.41 | 64.71 |
| Solyc04g011910.2.1 | Tomato | nucleus | 50.44 | 59.38 |
| Solyc05g051710.2.1 | Tomato | nucleus | 53.98 | 59.22 |
| KRH43319 | Soybean | nucleus | 48.67 | 57.29 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 50.44 | 57.0 |
| PGSC0003DMT400042668 | Potato | nucleus | 49.56 | 54.9 |
| PGSC0003DMT400077395 | Potato | nucleus | 48.67 | 51.89 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 30.97 | 51.47 |
| CDY18692 | Canola | nucleus | 61.95 | 49.65 |
| Bra009071.1-P | Field mustard | nucleus | 100.0 | 47.48 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 28.32 | 47.06 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 28.32 | 47.06 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 41.59 | 46.08 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 43.36 | 41.53 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 42.48 | 41.38 |
| Zm00001d027851_P001 | Maize | cytosol | 38.94 | 41.12 |
| KRH59453 | Soybean | cytosol | 46.9 | 41.09 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 41.59 | 39.5 |
| KXG38577 | Sorghum | cytosol | 39.82 | 39.47 |
| Os10t0405300-01 | Rice | plasma membrane | 39.82 | 38.14 |
| Os03t0169900-01 | Rice | cytosol | 38.94 | 37.93 |
| GSMUA_Achr10P... | Banana | nucleus | 42.48 | 37.5 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 39.82 | 36.89 |
| Zm00001d033003_P001 | Maize | cytosol | 37.17 | 36.21 |
| Zm00001d048317_P001 | Maize | cytosol | 38.94 | 35.77 |
| Zm00001d014200_P001 | Maize | nucleus | 37.17 | 34.71 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 31.86 | 32.73 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 32.74 | 31.09 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 31.86 | 30.51 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 39.82 | 30.41 |
| KRH15631 | Soybean | plastid | 46.02 | 30.06 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 33.63 | 29.92 |
Protein Annotations
| EnsemblPlants:CDY21617 | EnsemblPlantsGene:GSBRNA2T00016087001 | InterPro:TypeIII_avirulence_cleave | PANTHER:PTHR33882 | PANTHER:PTHR33882:SF2 | PFAM:PF05627 |
| ProteinID:CDY21617 | ProteinID:CDY21617.1 | SEG:seg | UniParc:UPI0004EE2C20 | UniProt:A0A078G9D6 | MapMan:35.2 |
Description
BnaC09g46750DBnaC09g46750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9D6]
Coordinates
chrLK032122:+:504619..505878
Molecular Weight (calculated)
12863.9 Da
IEP (calculated)
8.122
GRAVY (calculated)
-1.130
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDDRKEKNS PWLSVPQFGD WDQKGGGTIP DYSMDFTKIR EMRKQNKRDP SRASLGNEDE LVKPPESATT ATAKLTTVHS ENQHHFSPAH HHQPHSPSTR
101: RSIFSCFNCC VKA
101: RSIFSCFNCC VKA
001: MEDDRKEKNT PWLSVPQFGD WDQKGGGTMP DYSMDFTKIR EMRKQNKRDP SRASLGNEEE LIKPPESATS TAELTTVQSE NQREFSPSHH HQPHSPSTRR
101: SMFSCFNCCV KA
101: SMFSCFNCCV KA
Arabidopsis Description
At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.