Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69874 | Canola | nucleus | 47.06 | 100.0 |
| CDY21617 | Canola | nucleus | 47.48 | 100.0 |
| AT5G09960.1 | Thale cress | nucleus | 41.6 | 88.39 |
| Bra028607.1-P | Field mustard | nucleus | 39.92 | 84.07 |
| VIT_07s0031g01630.t01 | Wine grape | nucleus | 28.57 | 69.39 |
| Solyc04g051820.2.1 | Tomato | nucleus | 27.73 | 67.35 |
| KRH53801 | Soybean | nucleus | 27.73 | 64.71 |
| Solyc04g011910.2.1 | Tomato | nucleus | 23.95 | 59.38 |
| Solyc05g051710.2.1 | Tomato | nucleus | 25.63 | 59.22 |
| KRH43319 | Soybean | nucleus | 23.11 | 57.29 |
| KRH64143 | Soybean | cytosol, endoplasmic reticulum, nucleus | 23.95 | 57.0 |
| PGSC0003DMT400042668 | Potato | nucleus | 23.53 | 54.9 |
| PGSC0003DMT400077395 | Potato | nucleus | 23.11 | 51.89 |
| HORVU2Hr1G087230.1 | Barley | cytosol | 14.71 | 51.47 |
| Bra037798.1-P | Field mustard | nucleus | 29.83 | 50.35 |
| HORVU3Hr1G059370.1 | Barley | cytosol | 13.45 | 47.06 |
| HORVU6Hr1G039070.1 | Barley | cytosol | 13.45 | 47.06 |
| GSMUA_Achr6P10580_001 | Banana | nucleus | 19.75 | 46.08 |
| Bra024332.1-P | Field mustard | cytosol | 17.23 | 45.05 |
| Bra031897.1-P | Field mustard | cytosol | 28.57 | 44.44 |
| TraesCS4B01G286900.1 | Wheat | nucleus | 20.59 | 41.53 |
| TraesCS4A01G017200.1 | Wheat | nucleus | 20.17 | 41.38 |
| Zm00001d027851_P001 | Maize | cytosol | 18.49 | 41.12 |
| KRH59453 | Soybean | cytosol | 22.27 | 41.09 |
| TraesCS4D01G285600.1 | Wheat | nucleus | 19.75 | 39.5 |
| KXG38577 | Sorghum | cytosol | 18.91 | 39.47 |
| EER92785 | Sorghum | cytosol, mitochondrion, nucleus | 20.17 | 39.34 |
| Os10t0405300-01 | Rice | plasma membrane | 18.91 | 38.14 |
| Os03t0169900-01 | Rice | cytosol | 18.49 | 37.93 |
| GSMUA_Achr10P... | Banana | nucleus | 20.17 | 37.5 |
| Zm00001d048317_P001 | Maize | cytosol | 19.33 | 37.4 |
| Zm00001d033003_P001 | Maize | cytosol | 17.65 | 36.21 |
| Zm00001d014200_P001 | Maize | nucleus | 17.65 | 34.71 |
| KRH15631 | Soybean | plastid | 25.21 | 34.68 |
| HORVU2Hr1G071440.2 | Barley | cytosol | 15.55 | 33.64 |
| HORVU1Hr1G071050.2 | Barley | cytosol | 15.55 | 31.36 |
| HORVU5Hr1G046790.1 | Barley | cytosol | 15.55 | 31.09 |
| GSMUA_Achr3P21420_001 | Banana | nucleus | 18.91 | 30.41 |
| HORVU0Hr1G012080.1 | Barley | cytosol | 15.97 | 29.92 |
Protein Annotations
Description
AT5G09960 (E=3e-047) | unknown protein
Coordinates
chrA10:-:15129219..15135838
Molecular Weight (calculated)
27217.9 Da
IEP (calculated)
5.349
GRAVY (calculated)
-0.700
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQETQQLYQ LWRLAIQERD EAREQLMLLL AELSQLRELL NTVLLSKEKI GSYYLEAADE STGHQNCSYN LFPGDSPSNF SVNSCPLDLS VLSNQMRFVV
101: ENMRDYETVV LEMIGGVLPE NGFNQMEDDR KEKNSPWLSV PQFGDWDQKG GGTIPDYSMD FTKIREMRKQ NKRDPSRASL GNEDELVKPP ESATTATAKL
201: TTVHSENQHH FSPAHHHQPH SPSTRRSIFS CFNCCVKA
101: ENMRDYETVV LEMIGGVLPE NGFNQMEDDR KEKNSPWLSV PQFGDWDQKG GGTIPDYSMD FTKIREMRKQ NKRDPSRASL GNEDELVKPP ESATTATAKL
201: TTVHSENQHH FSPAHHHQPH SPSTRRSIFS CFNCCVKA
001: MEDDRKEKNT PWLSVPQFGD WDQKGGGTMP DYSMDFTKIR EMRKQNKRDP SRASLGNEEE LIKPPESATS TAELTTVQSE NQREFSPSHH HQPHSPSTRR
101: SMFSCFNCCV KA
101: SMFSCFNCCV KA
Arabidopsis Description
At5g09960 [Source:UniProtKB/TrEMBL;Acc:Q67XU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.