Factsheet for AT4G11390.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G11540.1	Thale cress	cytosol	55.49	57.71
CDY21921	Canola	plastid	39.01	56.05
AT4G01925.1	Thale cress	cytosol	27.47	53.57
AT4G11550.1	Thale cress	cytosol	60.81	49.7
CDY22036	Canola	cytosol	52.56	48.15
CDY52787	Canola	nucleus	54.4	47.07
AT4G01910.1	Thale cress	cytosol	55.13	46.24
AT4G01930.1	Thale cress	cytosol	55.13	46.17
CDY69979	Canola	nucleus	53.85	46.15
AT4G01920.1	Thale cress	cytosol	55.49	46.05
AT4G01740.1	Thale cress	cytosol	54.58	45.71
AT4G01760.1	Thale cress	cytosol	55.49	45.43
AT4G02190.1	Thale cress	cytosol	54.58	45.22
CDY65338	Canola	cytosol	53.3	43.43
AT3G27510.1	Thale cress	cytosol	33.33	41.36
CDY22034	Canola	endoplasmic reticulum	46.34	40.22
AT2G04500.1	Thale cress	cytosol	35.71	39.39
CDY52789	Canola	cytosol	27.47	36.95
AT4G14980.1	Thale cress	cytosol	36.81	36.88
CDY22035	Canola	cytosol	57.69	35.55
CDY50383	Canola	cytosol	54.4	35.23
AT5G44770.1	Thale cress	cytosol, nucleus, peroxisome	34.8	35.12
AT4G16015.1	Thale cress	cytosol	34.25	34.95
AT5G45730.1	Thale cress	nucleus	35.71	34.82
AT1G58037.1	Thale cress	cytosol	21.79	34.69
AT3G06990.1	Thale cress	nucleus	33.7	34.14
AT5G40320.1	Thale cress	nucleus	36.81	33.84
AT2G43220.1	Thale cress	peroxisome	32.97	33.46
AT1G65180.1	Thale cress	nucleus	39.74	33.23
AT5G54050.1	Thale cress	nucleus	35.16	33.1
AT3G07000.1	Thale cress	cytosol	34.8	33.1
AT5G54030.1	Thale cress	cytosol	25.27	32.94
AT3G43890.1	Thale cress	cytosol	39.56	32.68
AT5G54040.1	Thale cress	cytosol	35.53	32.55
AT5G54020.2	Thale cress	nucleus	34.07	31.63
AT5G29624.1	Thale cress	cytosol	28.02	31.35
AT5G22355.1	Thale cress	cytosol	37.91	31.17
AT3G27473.1	Thale cress	cytosol	37.18	30.66
AT3G27480.1	Thale cress	cytosol, nucleus, peroxisome	33.7	30.46
AT1G69150.1	Thale cress	cytosol	28.75	30.37
AT4G02180.1	Thale cress	cytosol	54.76	30.23
AT3G28650.1	Thale cress	cytosol	36.26	29.77
CDY50382	Canola	cytosol	53.3	29.33
AT3G46810.1	Thale cress	cytosol	36.81	29.3
AT4G01350.1	Thale cress	cytosol	34.8	29.14
AT2G19660.2	Thale cress	nucleus	36.81	29.13
AT3G46800.1	Thale cress	cytosol	36.08	28.89
AT2G04680.1	Thale cress	cytosol	34.62	28.77
AT3G27490.1	Thale cress	cytosol	35.9	28.74
AT5G59930.1	Thale cress	cytosol, nucleus, plasma membrane	34.25	28.51
AT3G45530.1	Thale cress	cytosol	36.08	28.47
CDY22052	Canola	nucleus	32.97	28.44
AT5G59940.1	Thale cress	cytosol	33.7	28.26
AT2G19650.1	Thale cress	cytosol	35.16	28.15
AT3G48400.1	Thale cress	cytosol	31.87	28.11
AT5G37620.1	Thale cress	cytosol	33.52	28.07
AT4G13992.1	Thale cress	mitochondrion	32.97	28.04
AT3G27500.1	Thale cress	cytosol	35.53	28.03
AT5G42840.1	Thale cress	cytosol	34.07	27.72
AT5G59920.1	Thale cress	cytosol	35.71	27.46
AT3G45840.1	Thale cress	mitochondrion, nucleus, peroxisome, vacuole	28.57	26.4
KRG95394	Soybean	nucleus	22.89	22.05
KRH67075	Soybean	nucleus	22.16	21.23
Bra036288.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.4	17.75

Protein Annotations

MapMan:35.2	EntrezGene:826743	UniProt:A0A1P8B397	ProteinID:ANM66071.1	ArrayExpress:AT4G11390	EnsemblPlantsGene:AT4G11390
RefSeq:AT4G11390	TAIR:AT4G11390	RefSeq:AT4G11390-TAIR-G	EnsemblPlants:AT4G11390.2	Unigene:At.54271	InterPro:DC1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0035556	InterPro:IPR002219	RefSeq:NP_001327993.1	InterPro:PE/DAG-bd	PFAM:PF03107
SMART:SM00109	SUPFAM:SSF57889	UniParc:UPI000849216B	SEG:seg	:	:

Description

Cysteine/Histidine-rich C1 domain family protein [Source:TAIR;Acc:AT4G11390]

Coordinates

chr4:+:6927892..6930576

Molecular Weight (calculated)

62935.8 Da

IEP (calculated)

7.832

GRAVY (calculated)

-0.270

Length

546 amino acids

Sequence
(BLAST)

001: MDCLLNPPPQ SILDLKAHAH QLIFRPRLDS FTCNACGLNG DRSPYICVQC DFMIHQECFS LPRLININRH DHRVARTSVL GVVNSVCGVC HQKVDWTWGG
101: YSCQRCPQYV IHSKCATRND VWNGKELEGV PEEIEDIKPY VVIYGNIIQH FSHKEHYLRF HVNGFFRDGN KRCSACTYPI GLQSFYECID CDFMLHQNCA
201: EFPRKKWHML HNDRLTLVTS VAEFFWCIAC RRMSNGFKYQ CGYGVLDVLC CSVSEPFVHP SHPDHPLYYI RQVKYRQCYG CNGRTYNVLT CIESCCGFVL
301: CFCCATLPQV VMHRVDDHPL SLCYGEKASG KYWCDICEKE LNPSTWFYTS KDHRASLHTK CVLGDFAGLM PRSTIKYGSR SYEVVLNNSV SRPFCRVCES
401: HCMYPISLKM LGTSDPYICS LNCQKRLNSL DNLTKKLEAL YVLKTTKKES DDDDRTQLQA LLLAEETAKK EPDYADRMQL HFVPLVSCSI CKRLEVVVND
501: ISQTGHGDRY KLVCMYCKYC CYASTNKVLT LKRHIYGGFE DQRLEP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.