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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G01925.1 Thale cress cytosol 35.81 67.14
AT4G11550.1 Thale cress cytosol 79.24 62.28
CDY21921 Canola plastid 44.0 60.79
AT4G01910.1 Thale cress cytosol 69.9 56.37
CDY69979 Canola nucleus 67.81 55.89
CDY52787 Canola nucleus 66.86 55.63
AT4G01930.1 Thale cress cytosol 68.95 55.52
AT4G11390.2 Thale cress cytosol 57.71 55.49
AT4G01920.1 Thale cress cytosol 69.52 55.47
AT4G02190.1 Thale cress cytosol 68.57 54.63
CDY65338 Canola cytosol 69.71 54.63
AT4G01760.1 Thale cress cytosol 69.33 54.57
CDY22034 Canola endoplasmic reticulum 65.33 54.53
CDY22036 Canola cytosol 61.9 54.53
AT4G01740.1 Thale cress cytosol 64.38 51.84
CDY52789 Canola cytosol 38.48 49.75
AT1G69150.1 Thale cress cytosol 42.67 43.33
CDY50383 Canola cytosol 68.57 42.7
AT1G58037.1 Thale cress cytosol 27.62 42.27
CDY22052 Canola nucleus 50.67 42.02
AT1G65180.1 Thale cress nucleus 50.67 40.74
AT3G43890.1 Thale cress cytosol 51.05 40.54
CDY22035 Canola cytosol 67.81 40.18
AT3G27510.1 Thale cress cytosol 33.14 39.55
AT2G04500.1 Thale cress cytosol 36.19 38.38
AT4G16015.1 Thale cress cytosol 38.86 38.13
AT2G43220.1 Thale cress peroxisome 39.05 38.1
AT3G06990.1 Thale cress nucleus 39.05 38.03
AT3G48400.1 Thale cress cytosol 44.76 37.96
AT4G14980.1 Thale cress cytosol 39.24 37.8
AT5G54030.1 Thale cress cytosol 30.1 37.71
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 42.86 37.25
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 38.29 37.15
AT5G45730.1 Thale cress nucleus 39.24 36.79
AT5G22355.1 Thale cress cytosol 46.48 36.75
AT4G02180.1 Thale cress cytosol 69.14 36.7
CDY50382 Canola cytosol 68.0 35.99
AT3G07000.1 Thale cress cytosol 39.24 35.89
AT5G40320.1 Thale cress nucleus 40.57 35.86
AT5G54050.1 Thale cress nucleus 39.43 35.69
AT3G27473.1 Thale cress cytosol 44.76 35.5
AT5G29624.1 Thale cress cytosol 32.57 35.04
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 43.62 34.91
AT3G28650.1 Thale cress cytosol 44.0 34.74
AT5G54040.1 Thale cress cytosol 39.24 34.56
AT4G01350.1 Thale cress cytosol 42.86 34.51
AT5G54020.2 Thale cress nucleus 38.1 34.01
AT3G46810.1 Thale cress cytosol 44.0 33.67
AT3G46800.1 Thale cress cytosol 43.24 33.28
AT3G27490.1 Thale cress cytosol 43.05 33.14
AT3G45530.1 Thale cress cytosol 43.62 33.09
AT5G59940.1 Thale cress cytosol 40.95 33.03
AT2G19660.2 Thale cress nucleus 43.24 32.9
AT2G04680.1 Thale cress cytosol 41.14 32.88
AT4G13992.1 Thale cress mitochondrion 40.0 32.71
AT5G59920.1 Thale cress cytosol 44.19 32.68
AT5G37620.1 Thale cress cytosol 40.38 32.52
AT3G27500.1 Thale cress cytosol 42.67 32.37
AT2G19650.1 Thale cress cytosol 41.52 31.96
AT5G42840.1 Thale cress cytosol 40.76 31.89
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 33.9 30.12
Bra036288.1-P Field mustard cytosol, nucleus, plasma membrane 69.9 21.94
KRG95394 Soybean nucleus 23.62 21.87
KRH67075 Soybean nucleus 22.29 20.53
Protein Annotations
MapMan:35.2EntrezGene:826758ProteinID:AEE83022.1ArrayExpress:AT4G11540EnsemblPlantsGene:AT4G11540RefSeq:AT4G11540
TAIR:AT4G11540RefSeq:AT4G11540-TAIR-GEnsemblPlants:AT4G11540.1TAIR:AT4G11540.1Unigene:At.65358ProteinID:CAB78197.1
ProteinID:CAB82159.1InterPro:DC1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0035556InterPro:IPR002219RefSeq:NP_192891.1
InterPro:PE/DAG-bdPFAM:PF03107UniProt:Q9LE85SMART:SM00109SUPFAM:SSF57889UniParc:UPI00000AA538
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9LE85]
Coordinates
chr4:-:6990861..6992555
Molecular Weight (calculated)
60743.0 Da
IEP (calculated)
7.031
GRAVY (calculated)
-0.264
Length
525 amino acids
Sequence
(BLAST)
001: MWIENLCYCC KICDFYVDLF CVKYPPPDVI DISETHHHKL THIKKWTKFN CIAKCGKKFY GFPYKCLECH LMFDMDCVWN PPEAKNQSEV NISSHPLHPL
101: KLHTSQPPDY SDEKCRLCTR KIEGLFYHCS SCNFSLDMRC VINPPPQFVM DLKVHDHELT LLPRLDSFTC NACGLKGDRS PYICVQCGFI IHQDCLSLPR
201: LININRHAHR VSRTSVLGVV NSVCGVCHQK VDWTWGGYSC QRCPQYVVHS KCATRKDVWN GKELEGVPEE IEDIEPYVVI DDNTIQHFSH KEHYLRFHVN
301: GLLWEENKRC SACTHPVRLQ SFYACKDCDF ILHQHCAESP KKEWHVLHND RLTLVTCVAN FFSCTACSRL SNGFMYQCDF MKLDVLCGLV SEPYIHPGHP
401: HHPLYYIPQV EEKQCNGCNN REVRVLTCIE SGCGYVLCFD CATLPQVVKH RVDGHPLSLC YGEEASGKYW CDICEKETYP KTWFYTCKDH RASLHTKCVL
501: GDLVGLMPRS TIDYYDISYE VVVNI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.