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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G01925.1 Thale cress cytosol 31.03 73.93
AT4G01910.1 Thale cress cytosol 68.22 69.89
AT4G11540.1 Thale cress cytosol 54.57 69.33
AT4G01920.1 Thale cress cytosol 67.62 68.54
AT4G01930.1 Thale cress cytosol 66.72 68.25
CDY52787 Canola nucleus 63.57 67.19
AT4G02190.1 Thale cress cytosol 65.97 66.77
AT4G11550.1 Thale cress cytosol 66.72 66.62
AT4G01740.1 Thale cress cytosol 65.07 66.56
CDY69979 Canola nucleus 63.42 66.41
CDY52789 Canola cytosol 39.73 65.27
CDY65338 Canola cytosol 65.52 65.22
CDY22036 Canola cytosol 57.72 64.6
CDY22034 Canola endoplasmic reticulum 58.02 61.53
CDY21921 Canola plastid 33.73 59.21
AT4G11390.2 Thale cress cytosol 45.43 55.49
AT1G65180.1 Thale cress nucleus 52.02 53.14
AT3G43890.1 Thale cress cytosol 50.08 50.53
CDY50383 Canola cytosol 63.57 50.3
AT1G69150.1 Thale cress cytosol 38.08 49.13
CDY22052 Canola nucleus 46.03 48.5
CDY22035 Canola cytosol 62.82 47.29
AT4G02180.1 Thale cress cytosol 68.52 46.21
AT1G58037.1 Thale cress cytosol 23.54 45.77
AT5G22355.1 Thale cress cytosol 42.43 42.62
AT5G45730.1 Thale cress nucleus 35.53 42.32
AT5G40320.1 Thale cress nucleus 37.63 42.26
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 38.23 42.22
AT4G16015.1 Thale cress cytosol 33.73 42.06
AT3G27510.1 Thale cress cytosol 27.74 42.05
AT3G46800.1 Thale cress cytosol 42.73 41.79
AT3G48400.1 Thale cress cytosol 38.68 41.68
CDY50382 Canola cytosol 61.92 41.63
AT3G06990.1 Thale cress nucleus 33.58 41.56
AT4G14980.1 Thale cress cytosol 33.88 41.47
AT2G43220.1 Thale cress peroxisome 33.43 41.45
AT3G46810.1 Thale cress cytosol 42.43 41.25
AT2G19660.2 Thale cress nucleus 42.58 41.16
AT2G04680.1 Thale cress cytosol 40.33 40.94
AT3G27473.1 Thale cress cytosol 40.63 40.94
AT2G04500.1 Thale cress cytosol 30.28 40.81
AT3G07000.1 Thale cress cytosol 35.08 40.77
AT3G28650.1 Thale cress cytosol 40.63 40.75
AT5G37620.1 Thale cress cytosol 39.58 40.49
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 32.83 40.48
AT5G54030.1 Thale cress cytosol 25.34 40.33
AT4G01350.1 Thale cress cytosol 39.28 40.18
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 39.43 40.09
AT5G59940.1 Thale cress cytosol 38.98 39.94
AT2G19650.1 Thale cress cytosol 40.48 39.59
AT3G45530.1 Thale cress cytosol 40.93 39.45
AT5G54050.1 Thale cress nucleus 34.03 39.14
AT4G13992.1 Thale cress mitochondrion 36.88 38.32
AT3G27490.1 Thale cress cytosol 39.13 38.27
AT3G27500.1 Thale cress cytosol 39.58 38.15
AT5G59920.1 Thale cress cytosol 40.03 37.61
AT5G54040.1 Thale cress cytosol 33.43 37.42
AT5G42840.1 Thale cress cytosol 37.18 36.96
AT5G54020.2 Thale cress nucleus 32.38 36.73
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 32.08 36.21
AT5G29624.1 Thale cress cytosol 26.24 35.86
KRH67075 Soybean nucleus 22.34 26.14
KRG95394 Soybean nucleus 22.19 26.1
Bra036288.1-P Field mustard cytosol, nucleus, plasma membrane 64.92 25.88
Protein Annotations
MapMan:35.2EntrezGene:828215UniProt:A0A178V4I1ProteinID:AAC72866.1ProteinID:AAD22638.1ProteinID:AEE82074.1
ArrayExpress:AT4G01760EnsemblPlantsGene:AT4G01760RefSeq:AT4G01760TAIR:AT4G01760RefSeq:AT4G01760-TAIR-GEnsemblPlants:AT4G01760.1
TAIR:AT4G01760.1Unigene:At.65316ProteinID:CAB77746.1InterPro:DC1RefSeq:NP_192085.1ProteinID:OAP00756.1
PFAM:PF03107PO:PO:0001016PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009032PO:PO:0009046PO:PO:0020038PO:PO:0025281UniProt:Q9ZSJ1SUPFAM:SSF57889
UniParc:UPI00000A4EEE:::::
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSJ1]
Coordinates
chr4:-:759055..761224
Molecular Weight (calculated)
76888.9 Da
IEP (calculated)
6.704
GRAVY (calculated)
-0.344
Length
667 amino acids
Sequence
(BLAST)
001: MDSDGVSVPL IHEHLMMPCN DLRRGDCCER LEAISDGYYC TTCDFFVHKK CGDEASECIE NPFHSNHPLR LGFLSRLQRQ HWLKVVRSCD LCGKNIGDLF
101: YRCEICDFDM DLHCAKYPPL EVIDIPEMHS HKLNLLKDRV EFDCDAKCGK IGYGFPYECH ECDSKFHVDC VRYSSSEEVK HPLEVNHSYH SLHPLKLLMG
201: QPPDYSDGKC RLCGRKIDDK LFYHCSSCNF TLDMRCVLNP PPKSVLDLKT HDHQLNLLPR LIFFTCNACG LNGDRSPYAC FQCDFLIHKD CFGLPRLINI
301: NRHDHRISRT SLIGIVNSVC GVCRQKVDWT CGGYSCQRCS TYIAHSKCAT REDVWNGKEL EGVPEEIEDI EPYVVIDDNT IQHFSHKEHY MRLNVNGLMC
401: EVNKRCNACN HPISPQSFYG CMDCDFILHQ NCAGFPRRKW HVLHNERLAL VTSEVNIFGC SACHKIFNGF RYEHEDTKLD VLCGSFSEPF IHPSHPHHPL
501: YCISPEDDEV CSGCNERSYH VLRCIEDNCG FILDFGCATF PQVVKHRIED QPLSLCYGEK ASGKYWCDIC EKETNPNTWF YTCKDHRASL HTWCVLGDFM
601: GLIPKSTIEL WNISYEVVLN NSISRPICRH CKSHCIPPII LKKIGTSDPY FCSLDCIESF KRLWRAK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.