Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G01925.1 | Thale cress | cytosol | 22.45 | 79.29 |
| AT4G01930.1 | Thale cress | cytosol | 48.74 | 73.93 |
| AT4G01910.1 | Thale cress | cytosol | 47.62 | 72.35 |
| AT4G01920.1 | Thale cress | cytosol | 48.13 | 72.34 |
| AT4G01740.1 | Thale cress | cytosol | 46.01 | 69.79 |
| AT4G11540.1 | Thale cress | cytosol | 36.7 | 69.14 |
| CDY52789 | Canola | cytosol | 28.31 | 68.97 |
| CDY52787 | Canola | nucleus | 43.88 | 68.78 |
| CDY69979 | Canola | nucleus | 44.29 | 68.76 |
| AT4G01760.1 | Thale cress | cytosol | 46.21 | 68.52 |
| AT4G02190.1 | Thale cress | cytosol | 44.69 | 67.07 |
| AT4G11550.1 | Thale cress | cytosol | 44.19 | 65.42 |
| CDY22036 | Canola | cytosol | 39.33 | 65.27 |
| CDY65338 | Canola | cytosol | 44.08 | 65.07 |
| CDY22034 | Canola | endoplasmic reticulum | 40.34 | 63.43 |
| CDY21921 | Canola | plastid | 23.66 | 61.58 |
| AT4G11390.2 | Thale cress | cytosol | 30.23 | 54.76 |
| CDY22052 | Canola | nucleus | 32.96 | 51.5 |
| CDY22035 | Canola | cytosol | 45.3 | 50.56 |
| AT1G65180.1 | Thale cress | nucleus | 32.96 | 49.92 |
| AT3G43890.1 | Thale cress | cytosol | 33.16 | 49.62 |
| CDY50383 | Canola | cytosol | 42.26 | 49.58 |
| AT1G69150.1 | Thale cress | cytosol | 25.68 | 49.13 |
| AT1G58037.1 | Thale cress | cytosol | 16.48 | 47.52 |
| CDY50382 | Canola | cytosol | 44.19 | 44.05 |
| AT3G06990.1 | Thale cress | nucleus | 23.36 | 42.86 |
| AT5G22355.1 | Thale cress | cytosol | 28.72 | 42.77 |
| AT5G40320.1 | Thale cress | nucleus | 25.68 | 42.76 |
| AT3G27510.1 | Thale cress | cytosol | 18.81 | 42.27 |
| AT4G16015.1 | Thale cress | cytosol | 22.85 | 42.24 |
| AT5G45730.1 | Thale cress | nucleus | 23.86 | 42.14 |
| AT2G04500.1 | Thale cress | cytosol | 21.03 | 42.02 |
| AT4G14980.1 | Thale cress | cytosol | 23.05 | 41.83 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 22.85 | 41.77 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 25.48 | 41.72 |
| AT4G01350.1 | Thale cress | cytosol | 27.3 | 41.41 |
| AT3G48400.1 | Thale cress | cytosol | 25.88 | 41.36 |
| AT2G43220.1 | Thale cress | peroxisome | 22.24 | 40.89 |
| AT2G19660.2 | Thale cress | nucleus | 28.51 | 40.87 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 27.0 | 40.7 |
| AT3G07000.1 | Thale cress | cytosol | 23.56 | 40.59 |
| AT3G46810.1 | Thale cress | cytosol | 28.11 | 40.52 |
| AT5G37620.1 | Thale cress | cytosol | 26.69 | 40.49 |
| AT5G59940.1 | Thale cress | cytosol | 26.49 | 40.25 |
| AT3G27473.1 | Thale cress | cytosol | 26.9 | 40.18 |
| AT3G28650.1 | Thale cress | cytosol | 27.0 | 40.15 |
| AT2G04680.1 | Thale cress | cytosol | 26.59 | 40.03 |
| AT5G54030.1 | Thale cress | cytosol | 16.89 | 39.86 |
| AT3G46800.1 | Thale cress | cytosol | 27.4 | 39.74 |
| AT4G13992.1 | Thale cress | mitochondrion | 25.58 | 39.41 |
| AT5G54050.1 | Thale cress | nucleus | 23.05 | 39.31 |
| AT3G27500.1 | Thale cress | cytosol | 27.4 | 39.16 |
| AT3G45530.1 | Thale cress | cytosol | 27.3 | 39.02 |
| AT5G59920.1 | Thale cress | cytosol | 28.01 | 39.01 |
| AT3G27490.1 | Thale cress | cytosol | 26.9 | 39.0 |
| AT2G19650.1 | Thale cress | cytosol | 26.59 | 38.56 |
| AT5G42840.1 | Thale cress | cytosol | 26.09 | 38.45 |
| AT5G29624.1 | Thale cress | cytosol | 18.71 | 37.91 |
| AT5G54020.2 | Thale cress | nucleus | 22.45 | 37.76 |
| AT5G54040.1 | Thale cress | cytosol | 22.65 | 37.58 |
| AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 21.74 | 36.38 |
| KRG95394 | Soybean | nucleus | 15.27 | 26.63 |
| Bra036288.1-P | Field mustard | cytosol, nucleus, plasma membrane | 44.99 | 26.6 |
| KRH67075 | Soybean | nucleus | 14.86 | 25.79 |
Protein Annotations
| MapMan:35.2 | EntrezGene:827483 | ProteinID:AAC78715.1 | ProteinID:AEE82134.1 | ArrayExpress:AT4G02180 | EnsemblPlantsGene:AT4G02180 |
| RefSeq:AT4G02180 | TAIR:AT4G02180 | RefSeq:AT4G02180-TAIR-G | EnsemblPlants:AT4G02180.1 | TAIR:AT4G02180.1 | Unigene:At.54094 |
| ProteinID:CAB80711.1 | InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0035556 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR002219 |
| RefSeq:NP_192127.1 | InterPro:PE/DAG-bd | PFAM:PF03107 | PO:PO:0009005 | UniProt:Q9ZU00 | SMART:SM00109 |
| SMART:SM00249 | SUPFAM:SSF57889 | UniParc:UPI00000A0E3D | InterPro:Znf_PHD | : | : |
Description
DC1 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU00]
Coordinates
chr4:+:959964..963678
Molecular Weight (calculated)
113848.0 Da
IEP (calculated)
6.841
GRAVY (calculated)
-0.346
Length
989 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLINQWFPL DTLATPERIR MACFDEFTSP FYMTMDSEGV LMPLVHEHLM MPWNDLRKGD CCGLSKAVSV GYYCKSCDFF AHKKCGESSE FIQHPSHPNH
101: TLQLRSSEGC NSCNLCGRTI SDLFYRCDLC DFDVDLYCAK YPPPEVIDIP ETHHHKLNLH KELIEFNCDA KCGKITGAEF PYVCYECQLP FHVDCVWRPS
201: ELKHPSEVNH SYHSLHPLKL LSGQLPDNCD GKCRLCARKI DDRLFYHCSP CNFTLDLRCV LNPPQQSLLN LKAHDHQLTL LPRLLSFTCN ACGLNGDRSP
301: YTCVQCDFMI HQDCLDLPRV ININQHDHRV SRTSVPGVGN SKGVLLPWFH RKHIMMPWND MRKGDCCGSL ESVTDGFYCK SCDIFIHKKC GESSGIIDHS
401: SHPDHTLELN RYPNKSCNLC GRSKGVNVCY RCDHCYYQLD LYCAKYPPPE FIDIPETHHH KLTLLKERIE FDCDAKCGET GDGFAYKCPE CDLFFHVDCV
501: WHPPEVNHPL EVNHSYHPWH PLKLHTGQPP HYSDGTCRLC ARNIDDRLFY HCSPCNFTLD LRCVLNPPPQ SLLNLKAHDH QLILLPRLRS FTCNACGLSG
601: DRSPYICIQC DFMIHQDCLD LPRLINVNRH DHRVSRTSVL GVVNSVCGVC HQKVDWTCGG FSCQRCSSYV VHSKCATRRD VWNGKELEGV PEEIEDIEPY
701: VVIDDNTIQH FSHKEHYLRL HVNDVLCNDN KRCKACTHPI FLQSFYSCMD CDFLLHQNCA GFPRMKRHVL HNERLTLVTN ETKLFQCAPC DRWSNGFRYQ
801: HGYKSLDLQC GSISEPFVHP SHPDHPLYHT LLDGRNEICD GCKKSWYYVL SCIEDDCRFV LCFKCLTLPQ VVKHRVDDDP LLLCYGEKAC GKYWCDICEK
901: ETNPETWFYT CKDHQSSMHT MCVLGDSVGI MPKSTIMGWY KYYEVVLNNS ISRPVCEMCK SRCIFPTIMK ILEASNEYVC SLACVLERG
101: TLQLRSSEGC NSCNLCGRTI SDLFYRCDLC DFDVDLYCAK YPPPEVIDIP ETHHHKLNLH KELIEFNCDA KCGKITGAEF PYVCYECQLP FHVDCVWRPS
201: ELKHPSEVNH SYHSLHPLKL LSGQLPDNCD GKCRLCARKI DDRLFYHCSP CNFTLDLRCV LNPPQQSLLN LKAHDHQLTL LPRLLSFTCN ACGLNGDRSP
301: YTCVQCDFMI HQDCLDLPRV ININQHDHRV SRTSVPGVGN SKGVLLPWFH RKHIMMPWND MRKGDCCGSL ESVTDGFYCK SCDIFIHKKC GESSGIIDHS
401: SHPDHTLELN RYPNKSCNLC GRSKGVNVCY RCDHCYYQLD LYCAKYPPPE FIDIPETHHH KLTLLKERIE FDCDAKCGET GDGFAYKCPE CDLFFHVDCV
501: WHPPEVNHPL EVNHSYHPWH PLKLHTGQPP HYSDGTCRLC ARNIDDRLFY HCSPCNFTLD LRCVLNPPPQ SLLNLKAHDH QLILLPRLRS FTCNACGLSG
601: DRSPYICIQC DFMIHQDCLD LPRLINVNRH DHRVSRTSVL GVVNSVCGVC HQKVDWTCGG FSCQRCSSYV VHSKCATRRD VWNGKELEGV PEEIEDIEPY
701: VVIDDNTIQH FSHKEHYLRL HVNDVLCNDN KRCKACTHPI FLQSFYSCMD CDFLLHQNCA GFPRMKRHVL HNERLTLVTN ETKLFQCAPC DRWSNGFRYQ
801: HGYKSLDLQC GSISEPFVHP SHPDHPLYHT LLDGRNEICD GCKKSWYYVL SCIEDDCRFV LCFKCLTLPQ VVKHRVDDDP LLLCYGEKAC GKYWCDICEK
901: ETNPETWFYT CKDHQSSMHT MCVLGDSVGI MPKSTIMGWY KYYEVVLNNS ISRPVCEMCK SRCIFPTIMK ILEASNEYVC SLACVLERG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.