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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 60.69 69.54
AT3G27473.1 Thale cress cytosol 65.9 68.88
AT3G27510.1 Thale cress cytosol 42.77 67.27
AT3G28650.1 Thale cress cytosol 64.31 66.92
AT5G42840.1 Thale cress cytosol 63.73 65.72
AT3G27500.1 Thale cress cytosol 63.44 63.44
AT3G27490.1 Thale cress cytosol 61.42 62.32
AT4G01925.1 Thale cress cytosol 19.22 47.5
AT4G11540.1 Thale cress cytosol 33.09 43.62
AT1G58037.1 Thale cress cytosol 21.24 42.86
AT4G01930.1 Thale cress cytosol 39.88 42.33
AT2G04500.1 Thale cress cytosol 29.91 41.82
AT4G01760.1 Thale cress cytosol 39.45 40.93
AT4G11550.1 Thale cress cytosol 39.45 40.87
AT4G01910.1 Thale cress cytosol 38.44 40.86
AT4G01740.1 Thale cress cytosol 38.44 40.8
AT2G43220.1 Thale cress peroxisome 31.65 40.71
AT5G22355.1 Thale cress cytosol 39.02 40.66
AT4G01920.1 Thale cress cytosol 38.58 40.58
AT5G45730.1 Thale cress nucleus 32.51 40.18
AT4G02190.1 Thale cress cytosol 38.01 39.91
AT4G16015.1 Thale cress cytosol 30.78 39.81
AT5G40320.1 Thale cress nucleus 33.96 39.56
AT2G04680.1 Thale cress cytosol 37.28 39.27
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 30.64 39.19
AT4G01350.1 Thale cress cytosol 36.85 39.11
AT3G06990.1 Thale cress nucleus 30.2 38.78
AT3G07000.1 Thale cress cytosol 32.08 38.68
AT3G46800.1 Thale cress cytosol 38.01 38.56
AT4G14980.1 Thale cress cytosol 30.35 38.53
AT1G65180.1 Thale cress nucleus 35.98 38.13
AT3G46810.1 Thale cress cytosol 37.43 37.76
AT5G37620.1 Thale cress cytosol 35.26 37.42
AT3G43890.1 Thale cress cytosol 35.55 37.22
AT5G59940.1 Thale cress cytosol 34.97 37.17
AT3G48400.1 Thale cress cytosol 33.24 37.16
AT1G69150.1 Thale cress cytosol 27.75 37.14
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 35.12 37.04
AT5G54030.1 Thale cress cytosol 22.4 36.99
AT2G19660.2 Thale cress nucleus 36.42 36.52
AT2G19650.1 Thale cress cytosol 35.84 36.36
AT4G11390.2 Thale cress cytosol 28.47 36.08
AT5G59920.1 Thale cress cytosol 36.99 36.06
AT5G54040.1 Thale cress cytosol 30.92 35.91
AT5G54050.1 Thale cress nucleus 29.91 35.69
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 30.35 35.53
AT5G54020.2 Thale cress nucleus 29.91 35.2
AT4G13992.1 Thale cress mitochondrion 32.51 35.05
AT5G29624.1 Thale cress cytosol 24.13 34.22
AT4G02180.1 Thale cress cytosol 39.02 27.3
KRG95394 Soybean nucleus 20.66 25.22
KRH67075 Soybean nucleus 20.09 24.39
Protein Annotations
MapMan:35.2EntrezGene:823694ProteinID:AEE78040.1ArrayExpress:AT3G45530EnsemblPlantsGene:AT3G45530RefSeq:AT3G45530
TAIR:AT3G45530RefSeq:AT3G45530-TAIR-GEnsemblPlants:AT3G45530.1TAIR:AT3G45530.1Unigene:At.50248ProteinID:CAB75482.1
InterPro:DC1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0035556GO:GO:0046872
InterPro:IPR002219RefSeq:NP_190139.1InterPro:PE/DAG-bdPFAM:PF03107PO:PO:0009005PFscan:PS50081
UniProt:Q9M1F4SMART:SM00249SUPFAM:SSF57889UniParc:UPI00000AB37FInterPro:Znf_PHD:
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9M1F4]
Coordinates
chr3:-:16701133..16703459
Molecular Weight (calculated)
78512.3 Da
IEP (calculated)
6.834
GRAVY (calculated)
-0.184
Length
692 amino acids
Sequence
(BLAST)
001: MSFKIKGHPH RVSLVKNHDG LECDACDQSY GDAYSCGECK FTVHKKCTFL FEVVPEIFEH PSHVGHCLKL LTTGAPDHTV PKCHLCGKNT KRLLYHCRDC
101: KLNVDIDCII DPMCAQADLN MPWHHHPLFM GNFATNMTCD VCYDNHVDGY ICLCCRLFVG WVCAALVIDS PEITHPCHTK HPLKLLTEGA PTYTDPKCHL
201: CGEDTGKFIY HCDICKFNLD LVCAKTKTPP VALSNLKVHE HTLNLMPRLI SFVCDACGTK GDRAPYVCHQ CDFMVHKKCA HLPRVINVNH HDHRVSFKYP
301: LGLGEWRCGV CFEEIDWSCG AYSCSLCPQY AIHSLCATRK DVWNGKELDG VPEEVEDIEP FKRNDDNTIT HFAHEHNLMS LSKDGEESSL CGACVLPIGS
401: YTFYKCSKSN CSFILHEKCA NISKKKRHFL SSEPLILCFE SIIDDDFLCR ACYQMFCEGF FYSSKGVNFD LICSSITMPF IHGSHDHHLL YVKQEEGNKK
501: TCHNCDNERA KVLLGCIKCN YFLDFRCATM PLTIMLPRYD DHPLTLCYGE EKASGKYWCD ICERETNPET WFYTCNDCGV TLHTFCVLGD IRNAKAGGSF
601: RHHGELELLP NNRSTRPLCN SCHSRCPGSF IMKSYDGGEV YCSCYCVSSQ LGYTYKGADT CPPWAIYELE LIVVIHVNYL STYILHYLTA IK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.