Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G01925.1 | Thale cress | cytosol | 37.03 | 45.36 |
| AT5G45730.1 | Thale cress | nucleus | 70.26 | 43.04 |
| AT5G54030.1 | Thale cress | cytosol | 49.56 | 40.57 |
| AT3G06990.1 | Thale cress | nucleus | 62.39 | 39.7 |
| AT3G07000.1 | Thale cress | cytosol | 65.6 | 39.2 |
| AT4G14980.1 | Thale cress | cytosol | 50.73 | 31.93 |
| AT5G44770.1 | Thale cress | cytosol, nucleus, peroxisome | 48.98 | 31.05 |
| AT5G29624.1 | Thale cress | cytosol | 44.02 | 30.94 |
| AT2G04500.1 | Thale cress | cytosol | 43.44 | 30.1 |
| AT5G54050.1 | Thale cress | nucleus | 49.85 | 29.48 |
| AT5G54020.2 | Thale cress | nucleus | 49.85 | 29.08 |
| AT5G54040.1 | Thale cress | cytosol | 50.44 | 29.03 |
| AT1G69150.1 | Thale cress | cytosol | 43.44 | 28.82 |
| AT4G11540.1 | Thale cress | cytosol | 42.27 | 27.62 |
| AT2G43220.1 | Thale cress | peroxisome | 42.57 | 27.14 |
| AT4G11550.1 | Thale cress | cytosol | 48.69 | 25.0 |
| AT5G40320.1 | Thale cress | nucleus | 43.15 | 24.92 |
| AT4G01930.1 | Thale cress | cytosol | 47.23 | 24.85 |
| AT1G65180.1 | Thale cress | nucleus | 46.65 | 24.5 |
| AT4G16015.1 | Thale cress | cytosol | 38.19 | 24.49 |
| AT4G01920.1 | Thale cress | cytosol | 46.65 | 24.32 |
| AT4G01910.1 | Thale cress | cytosol | 45.48 | 23.96 |
| AT4G02190.1 | Thale cress | cytosol | 45.48 | 23.67 |
| AT3G48400.1 | Thale cress | cytosol | 42.57 | 23.59 |
| AT4G01760.1 | Thale cress | cytosol | 45.77 | 23.54 |
| AT3G27480.1 | Thale cress | cytosol, nucleus, peroxisome | 41.4 | 23.51 |
| AT4G01740.1 | Thale cress | cytosol | 44.31 | 23.31 |
| AT3G43890.1 | Thale cress | cytosol | 44.9 | 23.3 |
| AT3G27510.1 | Thale cress | cytosol | 29.74 | 23.18 |
| AT5G22355.1 | Thale cress | cytosol | 44.61 | 23.04 |
| AT2G04680.1 | Thale cress | cytosol | 42.86 | 22.37 |
| AT5G37620.1 | Thale cress | cytosol | 42.27 | 22.24 |
| AT3G27473.1 | Thale cress | cytosol | 42.57 | 22.05 |
| AT3G46810.1 | Thale cress | cytosol | 44.02 | 22.01 |
| AT2G19650.1 | Thale cress | cytosol | 43.73 | 21.99 |
| AT3G27490.1 | Thale cress | cytosol | 43.44 | 21.85 |
| AT3G46800.1 | Thale cress | cytosol | 43.44 | 21.85 |
| AT4G11390.2 | Thale cress | cytosol | 34.69 | 21.79 |
| AT2G19660.2 | Thale cress | nucleus | 43.73 | 21.74 |
| AT4G01350.1 | Thale cress | cytosol | 40.52 | 21.32 |
| AT3G45530.1 | Thale cress | cytosol | 42.86 | 21.24 |
| AT5G59930.1 | Thale cress | cytosol, nucleus, plasma membrane | 40.23 | 21.04 |
| AT5G42840.1 | Thale cress | cytosol | 41.11 | 21.01 |
| AT3G28650.1 | Thale cress | cytosol | 39.94 | 20.6 |
| AT4G13992.1 | Thale cress | mitochondrion | 38.48 | 20.56 |
| AT3G27500.1 | Thale cress | cytosol | 41.4 | 20.52 |
| AT5G59920.1 | Thale cress | cytosol | 41.69 | 20.14 |
| AT5G59940.1 | Thale cress | cytosol | 38.19 | 20.12 |
| AT3G45840.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 29.45 | 17.09 |
| AT4G02180.1 | Thale cress | cytosol | 47.52 | 16.48 |
| KRG95394 | Soybean | nucleus | 22.16 | 13.4 |
| KRH67075 | Soybean | nucleus | 21.87 | 13.16 |
Protein Annotations
| ArrayExpress:AT1G58037 | EMBL:DQ492217 | EnsemblPlants:AT1G58037.1 | EnsemblPlantsGene:AT1G58037 | EntrezGene:3767562 | InterPro:DC1 |
| PANTHER:PTHR32410 | PFAM:PF03107 | ProteinID:ABF59302.1 | ProteinID:AEE33489.1 | RefSeq:AT1G58037 | RefSeq:AT1G58037-TAIR-G |
| RefSeq:NP_001031203.1 | SEG:seg | SUPFAM:SSF57889 | TAIR:AT1G58037 | TAIR:AT1G58037.1 | UniParc:UPI00005DBF92 |
| UniProt:Q2V4G4 | MapMan:35.2 | : | : | : | : |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q2V4G4]
Coordinates
chr1:-:21472554..21474602
Molecular Weight (calculated)
39716.3 Da
IEP (calculated)
6.386
GRAVY (calculated)
-0.488
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMYEYEISR IPRVKIPCSH PLVSWWLMHT GSGDPHEYLP CDGCGDTEGN AIYCKICKFR AHFECIIQPD IINHPCHSKH PLKKVLAETI DYTDGNCHFC
101: RSPLDEVMYH CSICNISIDL SCWIYPPPLT IYQPKSHNHT FTLMARKDSF TCNACGLVGD RNPYVCLECD FMLHKDCIDL PRVININRHD HRISRTYHLG
201: QGDWECGVCR KQIDWTFGGY SCKRCPSYAV HSKCATRGDV WEGEELEDEP EEEEIEDPYK VIDEKEILHF SHEHNLRLGD DNAADNEKCH ACVFPINSDP
301: FYQCVQCKFL LHKVCATLPR KKRNILHNHK LDLQIQGKPG EVF
101: RSPLDEVMYH CSICNISIDL SCWIYPPPLT IYQPKSHNHT FTLMARKDSF TCNACGLVGD RNPYVCLECD FMLHKDCIDL PRVININRHD HRISRTYHLG
201: QGDWECGVCR KQIDWTFGGY SCKRCPSYAV HSKCATRGDV WEGEELEDEP EEEEIEDPYK VIDEKEILHF SHEHNLRLGD DNAADNEKCH ACVFPINSDP
301: FYQCVQCKFL LHKVCATLPR KKRNILHNHK LDLQIQGKPG EVF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.