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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G01925.1 Thale cress cytosol 29.89 70.36
AT4G11540.1 Thale cress cytosol 54.63 68.57
AT4G01910.1 Thale cress cytosol 66.92 67.74
CDY52787 Canola nucleus 64.19 67.04
AT4G01930.1 Thale cress cytosol 65.71 66.41
AT4G01760.1 Thale cress cytosol 66.77 65.97
AT4G01920.1 Thale cress cytosol 65.4 65.5
AT4G01740.1 Thale cress cytosol 64.8 65.49
CDY69979 Canola nucleus 63.13 65.31
CDY52789 Canola cytosol 40.21 65.27
AT4G11550.1 Thale cress cytosol 65.25 64.37
CDY65338 Canola cytosol 65.25 64.18
CDY22036 Canola cytosol 57.21 63.26
CDY22034 Canola endoplasmic reticulum 57.81 60.57
CDY21921 Canola plastid 33.99 58.95
AT4G11390.2 Thale cress cytosol 45.22 54.58
AT1G65180.1 Thale cress nucleus 48.56 49.0
CDY50383 Canola cytosol 62.37 48.75
CDY22052 Canola nucleus 46.59 48.5
CDY22035 Canola cytosol 62.97 46.84
AT3G43890.1 Thale cress cytosol 46.13 45.99
AT1G69150.1 Thale cress cytosol 35.96 45.84
AT1G58037.1 Thale cress cytosol 23.67 45.48
AT4G02180.1 Thale cress cytosol 67.07 44.69
AT5G22355.1 Thale cress cytosol 42.79 42.47
AT4G16015.1 Thale cress cytosol 34.14 42.06
AT5G45730.1 Thale cress nucleus 35.66 41.96
AT2G43220.1 Thale cress peroxisome 34.14 41.82
AT4G14980.1 Thale cress cytosol 34.45 41.65
AT4G01350.1 Thale cress cytosol 41.12 41.56
AT5G59930.1 Thale cress cytosol, nucleus, plasma membrane 41.27 41.46
AT2G19660.2 Thale cress nucleus 43.4 41.45
AT2G04680.1 Thale cress cytosol 41.27 41.4
AT5G59940.1 Thale cress cytosol 40.67 41.17
AT5G40320.1 Thale cress nucleus 37.03 41.08
AT3G27480.1 Thale cress cytosol, nucleus, peroxisome 37.63 41.06
AT5G54030.1 Thale cress cytosol 26.1 41.05
AT3G48400.1 Thale cress cytosol 38.24 40.71
AT3G06990.1 Thale cress nucleus 33.23 40.63
AT3G46800.1 Thale cress cytosol 42.03 40.62
CDY50382 Canola cytosol 60.85 40.42
AT5G59920.1 Thale cress cytosol 43.55 40.42
AT3G27510.1 Thale cress cytosol 26.86 40.23
AT5G37620.1 Thale cress cytosol 39.76 40.18
AT5G44770.1 Thale cress cytosol, nucleus, peroxisome 32.78 39.93
AT3G07000.1 Thale cress cytosol 34.75 39.9
AT3G27473.1 Thale cress cytosol 40.06 39.88
AT2G04500.1 Thale cress cytosol 29.74 39.6
AT3G46810.1 Thale cress cytosol 40.97 39.36
AT3G28650.1 Thale cress cytosol 39.45 39.1
AT4G13992.1 Thale cress mitochondrion 38.09 39.1
AT2G19650.1 Thale cress cytosol 40.06 38.71
AT5G54050.1 Thale cress nucleus 33.99 38.62
AT3G45530.1 Thale cress cytosol 39.91 38.01
AT3G27490.1 Thale cress cytosol 39.3 37.98
AT5G54040.1 Thale cress cytosol 33.99 37.58
AT5G29624.1 Thale cress cytosol 27.77 37.5
AT5G42840.1 Thale cress cytosol 38.09 37.41
AT3G27500.1 Thale cress cytosol 39.15 37.28
AT5G54020.2 Thale cress nucleus 32.78 36.73
AT3G45840.1 Thale cress mitochondrion, nucleus, peroxisome, vacuole 32.78 36.55
KRH67075 Soybean nucleus 23.67 27.37
KRG95394 Soybean nucleus 23.52 27.34
Bra036288.1-P Field mustard cytosol, nucleus, plasma membrane 64.49 25.4
Protein Annotations
ArrayExpress:AT4G02190EnsemblPlants:AT4G02190.1EnsemblPlantsGene:AT4G02190EntrezGene:828115Gene3D:3.30.60.20InterPro:DC1
PFAM:PF03107ProteinID:AAC78708.1ProteinID:AEE82135.1ProteinID:CAB80712.1ProteinID:OAO98293.1RefSeq:AT4G02190
RefSeq:AT4G02190-TAIR-GRefSeq:NP_192128.1SUPFAM:SSF57889TAIR:AT4G02190TAIR:AT4G02190.1Unigene:At.54095
UniParc:UPI00000A6A55UniProt:A0A178UXF2UniProt:O04257MapMan:35.2::
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:O04257]
Coordinates
chr4:+:967372..969351
Molecular Weight (calculated)
75769.1 Da
IEP (calculated)
6.921
GRAVY (calculated)
-0.321
Length
659 amino acids
Sequence
(BLAST)
001: MDSEGVLLRL IHEHSMIPCN HLRKGDCCGR FEAISDGYYC KTCDFFVHKK CVDEASESIE HPSHPGHTLQ LLSKQKYRYC NLCGRDIKDL CYHFGNFDVD
101: LYCAKYPPPE VIESSETPCH KRTLLKEKIE FHCDAKCEEI GYGFPYKCLE CGLTFHIDCV LHPSGVKHLP EVIHPLDVKN HSCHPLHPLK LVLTGQLPDY
201: SDGKCRLCEK KIDSPLFYHC SPCNFTLDMR CALNPPSISF EDSKTHDHQL TLLPRLDSFT CNACGLKGDR SPYICVQCNF IIHQECLTLP RLININRHDH
301: RVARTNLLGL VYSVCGVCRQ KVDWTWGGYS CQRCSNYVVH SKCATRKDVW NGKELEGVIE ETEDIEPYVV IDDNTIQHFS HEEHYLKLDD NGVLCDENKR
401: CSACTHSVCL ESFYGCMDCD FILHQNCAKF PKRKRHVLHN ERLTLFTREA GHFWCNVCGR ISNGFSYQYG DMKLDVICCS VLEPFVHPSH PDHPLYYISP
501: EMEEVCNGCN MSGTRMLRCI EDGCGFVLCF KCATLPRVLK HRVDDYPLLL CYGEKANGIY WCEICEKKMN PEKWFYTCKD QWASLHTECV VGDFSGLMPG
601: SVVKAETGSY EVVLNKNVSR PFCRQCKSHC MYPIIYKIPE TSVSYLCSDI CIKRFTKRD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.