Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69979 | Canola | nucleus | 68.84 | 67.97 |
| CDY52787 | Canola | nucleus | 67.57 | 67.35 |
| CDY52789 | Canola | cytosol | 43.4 | 67.24 |
| AT4G01925.1 | Thale cress | cytosol | 29.73 | 66.79 |
| AT4G11540.1 | Thale cress | cytosol | 54.53 | 65.33 |
| CDX97701 | Canola | cytosol | 21.78 | 64.62 |
| CDY22036 | Canola | cytosol | 60.89 | 64.26 |
| CDY65338 | Canola | cytosol | 68.04 | 63.88 |
| CDY21921 | Canola | plastid | 37.84 | 62.63 |
| AT4G01910.1 | Thale cress | cytosol | 63.91 | 61.75 |
| AT4G01930.1 | Thale cress | cytosol | 63.12 | 60.89 |
| CDY22052 | Canola | nucleus | 61.05 | 60.66 |
| AT4G01920.1 | Thale cress | cytosol | 61.53 | 58.81 |
| AT4G01760.1 | Thale cress | cytosol | 61.53 | 58.02 |
| AT4G02190.1 | Thale cress | cytosol | 60.57 | 57.81 |
| AT4G01740.1 | Thale cress | cytosol | 59.46 | 57.36 |
| AT4G11550.1 | Thale cress | cytosol | 58.98 | 55.54 |
| CDY50383 | Canola | cytosol | 68.84 | 51.36 |
| CDY50382 | Canola | cytosol | 76.95 | 48.79 |
| CDY22035 | Canola | cytosol | 66.61 | 47.29 |
| CDY06776 | Canola | cytosol | 21.3 | 47.02 |
| AT4G11390.2 | Thale cress | cytosol | 40.22 | 46.34 |
| CDY52927 | Canola | cytosol | 26.39 | 44.03 |
| CDY29992 | Canola | cytosol | 17.81 | 42.75 |
| CDY48718 | Canola | cytosol | 24.8 | 42.05 |
| CDY63460 | Canola | cytosol, mitochondrion | 27.19 | 41.11 |
| CDY30196 | Canola | cytosol | 26.39 | 40.59 |
| AT4G02180.1 | Thale cress | cytosol | 63.43 | 40.34 |
| CDY46706 | Canola | mitochondrion | 34.02 | 40.15 |
| CDX74184 | Canola | plasma membrane | 25.6 | 39.27 |
| CDY63456 | Canola | cytosol | 24.48 | 38.99 |
| CDY41709 | Canola | peroxisome | 32.43 | 38.78 |
| CDY51540 | Canola | nucleus | 31.16 | 38.21 |
| CDX74183 | Canola | cytosol | 20.83 | 38.08 |
| CDY28703 | Canola | cytosol | 29.73 | 37.55 |
| CDX93183 | Canola | cytosol | 39.75 | 37.54 |
| CDY58516 | Canola | nucleus | 29.89 | 37.45 |
| CDY27940 | Canola | cytosol | 33.55 | 37.41 |
| CDY36839 | Canola | cytosol | 34.5 | 35.87 |
| CDX67463 | Canola | cytosol | 26.07 | 35.34 |
| CDY09240 | Canola | cytosol | 26.55 | 35.16 |
| CDY09238 | Canola | cytosol | 26.55 | 35.16 |
| CDX71062 | Canola | cytosol | 34.98 | 35.14 |
| CDX88733 | Canola | cytosol | 34.82 | 35.1 |
| CDY43524 | Canola | cytosol | 27.98 | 34.78 |
| CDY64703 | Canola | cytosol | 36.57 | 34.64 |
| CDY30007 | Canola | cytosol, nucleus, plastid | 35.29 | 33.38 |
| CDY29993 | Canola | cytosol | 32.43 | 33.06 |
| CDY21132 | Canola | cytosol | 31.8 | 32.68 |
| CDY44167 | Canola | cytosol | 24.96 | 31.91 |
| CDY63290 | Canola | cytosol | 25.44 | 31.87 |
| CDY44574 | Canola | cytosol | 24.32 | 31.74 |
| CDY22883 | Canola | cytosol | 32.59 | 31.39 |
| CDY27938 | Canola | cytosol | 21.46 | 30.75 |
| CDY42579 | Canola | nucleus | 13.35 | 30.66 |
| CDY60784 | Canola | cytosol | 16.22 | 30.36 |
| CDY36353 | Canola | plastid | 14.79 | 29.81 |
| CDY40661 | Canola | cytosol | 34.18 | 28.22 |
| CDX82703 | Canola | cytosol | 38.79 | 25.29 |
| KRG95394 | Soybean | nucleus | 22.73 | 25.22 |
| KRH67075 | Soybean | nucleus | 22.58 | 24.91 |
Protein Annotations
| EnsemblPlants:CDY22034 | EnsemblPlantsGene:GSBRNA2T00018401001 | Gene3D:3.30.40.10 | GO:A0A078G9L6 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0047134 | InterPro:DC1 | InterPro:IPR013083 |
| InterPro:Znf_RING/FYVE/PHD | PFAM:PF03107 | ProteinID:CDY22034 | ProteinID:CDY22034.1 | SEG:seg | SUPFAM:SSF57889 |
| TMHMM:TMhelix | UniParc:UPI0004EE9DE3 | UniProt:A0A078G9L6 | MapMan:35.2 | : | : |
Description
BnaA09g00630DBnaA09g00630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9L6]
Coordinates
chrLK032127:+:205028..208118
Molecular Weight (calculated)
72652.0 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.338
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCVLMEHVV FALELDLSPL FNLSFFFFIF FSILESKMES EGGVLLPLFH EHPMTPWNDH HMRKGDCCDC FEPQSDGYYY CKLCDFFVHK KCGDELSEFI
101: SDHPSHPDHT LRLQEKREDH VCYICDSKIQ NLSYRCEMCD FHMDLHCAKY PPPDIIENFE MHPHKLTFVK ELSAFHCSAK CGKTSAYAAG FSCGFYYQCN
201: ECDAVAFHVE CVWHPAALEH STEVNHPYHS LHPLKLFKGP PPDYSDGKCR LCGRKVDKEL FYHCSSCNFT LDWRCVVNPP PQSLLNLKAH DHQLKLLPRL
301: LSFTCNACGL KGDRSPYMCV QCDFMIHQGC LGLPRVININ RHDHRVSRTL LLGDGAMNSV CEVCHKKVDW TCGGFSCQTC PNYVVHSKCA TRYDVWNMKE
401: LEGVPEEEED IEPYVVIDDN TIQHFSHKEH YLIFNENGVL YEDKKRCSAC THPIGLQSFY GCMDCDFSLH QCCAKCPKKK RHVLHNERLT LFTNKELDTF
501: RCYACSRMCN GFIYKDRYTK LDVLCGSTGI CNGCNNKEYR LLKCIEDDCG FVICFKCATL PQVVKHRVDD HPLSLCYVEE EEASGKYWCD ICERETDPKK
601: WFYTCKDHLA SLHTKCVLGD TAGLMPRSR
101: SDHPSHPDHT LRLQEKREDH VCYICDSKIQ NLSYRCEMCD FHMDLHCAKY PPPDIIENFE MHPHKLTFVK ELSAFHCSAK CGKTSAYAAG FSCGFYYQCN
201: ECDAVAFHVE CVWHPAALEH STEVNHPYHS LHPLKLFKGP PPDYSDGKCR LCGRKVDKEL FYHCSSCNFT LDWRCVVNPP PQSLLNLKAH DHQLKLLPRL
301: LSFTCNACGL KGDRSPYMCV QCDFMIHQGC LGLPRVININ RHDHRVSRTL LLGDGAMNSV CEVCHKKVDW TCGGFSCQTC PNYVVHSKCA TRYDVWNMKE
401: LEGVPEEEED IEPYVVIDDN TIQHFSHKEH YLIFNENGVL YEDKKRCSAC THPIGLQSFY GCMDCDFSLH QCCAKCPKKK RHVLHNERLT LFTNKELDTF
501: RCYACSRMCN GFIYKDRYTK LDVLCGSTGI CNGCNNKEYR LLKCIEDDCG FVICFKCATL PQVVKHRVDD HPLSLCYVEE EEASGKYWCD ICERETDPKK
601: WFYTCKDHLA SLHTKCVLGD TAGLMPRSR
001: MDSDGVSVPL IHEHLMMPCN DLRRGDCCER LEAISDGYYC TTCDFFVHKK CGDEASECIE NPFHSNHPLR LGFLSRLQRQ HWLKVVRSCD LCGKNIGDLF
101: YRCEICDFDM DLHCAKYPPL EVIDIPEMHS HKLNLLKDRV EFDCDAKCGK IGYGFPYECH ECDSKFHVDC VRYSSSEEVK HPLEVNHSYH SLHPLKLLMG
201: QPPDYSDGKC RLCGRKIDDK LFYHCSSCNF TLDMRCVLNP PPKSVLDLKT HDHQLNLLPR LIFFTCNACG LNGDRSPYAC FQCDFLIHKD CFGLPRLINI
301: NRHDHRISRT SLIGIVNSVC GVCRQKVDWT CGGYSCQRCS TYIAHSKCAT REDVWNGKEL EGVPEEIEDI EPYVVIDDNT IQHFSHKEHY MRLNVNGLMC
401: EVNKRCNACN HPISPQSFYG CMDCDFILHQ NCAGFPRRKW HVLHNERLAL VTSEVNIFGC SACHKIFNGF RYEHEDTKLD VLCGSFSEPF IHPSHPHHPL
501: YCISPEDDEV CSGCNERSYH VLRCIEDNCG FILDFGCATF PQVVKHRIED QPLSLCYGEK ASGKYWCDIC EKETNPNTWF YTCKDHRASL HTWCVLGDFM
601: GLIPKSTIEL WNISYEVVLN NSISRPICRH CKSHCIPPII LKKIGTSDPY FCSLDCIESF KRLWRAK
101: YRCEICDFDM DLHCAKYPPL EVIDIPEMHS HKLNLLKDRV EFDCDAKCGK IGYGFPYECH ECDSKFHVDC VRYSSSEEVK HPLEVNHSYH SLHPLKLLMG
201: QPPDYSDGKC RLCGRKIDDK LFYHCSSCNF TLDMRCVLNP PPKSVLDLKT HDHQLNLLPR LIFFTCNACG LNGDRSPYAC FQCDFLIHKD CFGLPRLINI
301: NRHDHRISRT SLIGIVNSVC GVCRQKVDWT CGGYSCQRCS TYIAHSKCAT REDVWNGKEL EGVPEEIEDI EPYVVIDDNT IQHFSHKEHY MRLNVNGLMC
401: EVNKRCNACN HPISPQSFYG CMDCDFILHQ NCAGFPRRKW HVLHNERLAL VTSEVNIFGC SACHKIFNGF RYEHEDTKLD VLCGSFSEPF IHPSHPHHPL
501: YCISPEDDEV CSGCNERSYH VLRCIEDNCG FILDFGCATF PQVVKHRIED QPLSLCYGEK ASGKYWCDIC EKETNPNTWF YTCKDHRASL HTWCVLGDFM
601: GLIPKSTIEL WNISYEVVLN NSISRPICRH CKSHCIPPII LKKIGTSDPY FCSLDCIESF KRLWRAK
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSJ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.