CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64703	Canola	cytosol	64.66	64.76
CDX74184	Canola	plasma membrane	38.05	61.71
CDX74183	Canola	cytosol	29.02	56.1
AT4G01350.1	Thale cress	cytosol	54.89	55.98
AT5G59940.1	Thale cress	cytosol	54.74	55.91
AT5G59920.1	Thale cress	cytosol	57.89	54.23
AT5G59930.1	Thale cress	cytosol, nucleus, plasma membrane	53.23	53.96
CDX71062	Canola	cytosol	50.08	53.19
CDY63290	Canola	cytosol	40.15	53.19
CDX88733	Canola	cytosol	49.17	52.4
CDY40661	Canola	cytosol	58.8	51.31
CDY09238	Canola	cytosol	34.89	48.84
CDY09240	Canola	cytosol	34.89	48.84
CDX67463	Canola	cytosol	31.13	44.61
CDY41709	Canola	peroxisome	34.74	43.92
CDY52927	Canola	cytosol	23.46	41.38
CDY52787	Canola	nucleus	38.2	40.25
CDY48718	Canola	cytosol	22.41	40.16
CDX97701	Canola	cytosol	12.78	40.09
CDY65338	Canola	cytosol	39.55	39.25
CDX93183	Canola	cytosol	39.25	39.19
CDY52789	Canola	cytosol	23.91	39.16
CDY22036	Canola	cytosol	35.04	39.09
CDY69979	Canola	nucleus	37.44	39.09
CDY58516	Canola	nucleus	29.32	38.84
CDY28703	Canola	cytosol	28.72	38.35
CDY51540	Canola	nucleus	29.17	37.82
CDY60784	Canola	cytosol	18.95	37.5
CDY63460	Canola	cytosol, mitochondrion	23.31	37.26
CDY06776	Canola	cytosol	15.94	37.19
CDY21921	Canola	plastid	21.05	36.84
CDY46706	Canola	mitochondrion	29.47	36.77
CDY30196	Canola	cytosol	22.56	36.67
CDY63456	Canola	cytosol	21.5	36.2
CDY22034	Canola	endoplasmic reticulum	33.38	35.29
CDY22883	Canola	cytosol	34.29	34.92
CDY36839	Canola	cytosol	31.73	34.88
CDY29992	Canola	cytosol	13.53	34.35
CDY44574	Canola	cytosol	24.81	34.23
CDY27940	Canola	cytosol	29.02	34.22
CDY27938	Canola	cytosol	22.56	34.17
CDY44167	Canola	cytosol	25.26	34.15
CDY36353	Canola	plastid	15.49	33.01
CDY43524	Canola	cytosol	24.36	32.02
CDY21132	Canola	cytosol	29.17	31.7
CDY42579	Canola	nucleus	12.78	31.02
CDY29993	Canola	cytosol	27.97	30.15
CDY50383	Canola	cytosol	37.74	29.77
CDY22052	Canola	nucleus	27.97	29.38
CDY22035	Canola	cytosol	38.05	28.56
KRG95394	Soybean	nucleus	22.86	26.81
KRH67075	Soybean	nucleus	22.41	26.14
CDX82703	Canola	cytosol	36.84	25.39
CDY50382	Canola	cytosol	36.69	24.6

Protein Annotations

MapMan:35.2	GO:A0A078GXP8	UniProt:A0A078GXP8	EnsemblPlants:CDY30007	ProteinID:CDY30007	ProteinID:CDY30007.1
InterPro:DC1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0035556
GO:GO:0046872	GO:GO:0047134	EnsemblPlantsGene:GSBRNA2T00044536001	InterPro:IPR002219	InterPro:PE/DAG-bd	PFAM:PF03107
SMART:SM00109	SMART:SM00249	SUPFAM:SSF57889	UniParc:UPI0004EE084F	InterPro:Znf_PHD	SEG:seg

Description

BnaC01g40010DBnaC01g40010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXP8]

Coordinates

chrLK032247:-:421721..423718

Molecular Weight (calculated)

75909.6 Da

IEP (calculated)

7.225

GRAVY (calculated)

-0.165

Length

665 amino acids

Sequence
(BLAST)

001: MDTTISPMYK LSIHEHPLLP SAMFIDGKCD GCRVRGLMYG SYYCNEANCY SWFHKDCAES PLEINHHPSH PEHPLLLTKM APAEDGTPCD FCGQEILSTC
101: YTCPTCKFKV DLICGTKPSP SVIEHPVCHD HTLVFLKKRM EEEKAPCEVC KESIDGPSYS CLECNNVYFH LDCVNLSKEV DHPCHSIHPL IKIMPSESLI
201: DDDDAHKSCS FCLVQPKNVL YRCSICNFTL CLGCTKRPPP LVVDDAKTHT HPVTLFPSKI KFTCKVAGIE IDSFSYICLK CGFIVSVYCV GLPRLININR
301: HDHRIAFTHH LGHKGANCGV CRKSVRQYYG AYSCPICPKF VVHSRCAANY SVWNGVDLEG IPETSEDIVP FKVVGDNLIR HCMHEKHILL LLKDYYMVGD
401: DYKRVRCEAC VSPIGFGPVY SCQECCFFLH EKCAHLPMKK NLVFSPTPYM LEYQGKAVYC NLCRLFSGGF KYTNQERWAY SFVDVHCSSI SEPFVHNGHL
501: HPLYFVETKE KRPCDACRGF RDGYMLNCSA CDFDLCFYCA TLPIKLWHIS DEHPLTLYYG RRQKATRQNW CEVCEMELDS SKWFFTCFDC GVALHDKCVL
601: GDFSRLTPNY SIHFRGKEYL VILNNLNSRP SCRSCHDRCK APVILQVNDE HNGYICSNSC LYRVI

Best Arabidopsis Sequence Match ( AT5G59920.1 )
(BLAST)

001: MATEAVDLPI HEHPLFPSAR CIDDECDGCH VNGFMYAGYF CNEPYCYVWF HKDCAEAPGE ISHSSHPEHP LLLTNDSKDG PCDLCGQKLL TPCYSCPTCE
101: FKVDLTCGMK PSPPAIEHPL CHDHAVVFLK IREEKVPCEL CKESIEGPSY SCLECDMYFH VNCVHLSEEV NHPCHSIHPL KLITSESLTD DAEKSCLLCG
201: NIPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHMKTHKHP LTLLPRRISC ICDVCGKKCQ FTAYVCLQCD FVTARKCIDR PRVININRHD HRIYLTHHLG
301: TGYSECGVCH KNVSQYKGAY SCSVCPNYAV HSTCAVRTDV WDGVELEGTT EITEDISPFK VVGDNLICHF SHEEHQLKLH KEDVIHDERR RCEACIHPVQ
401: FGSIYVCEEE ECCFVLHEKC ANLPMKKRLV FGTRPYTLMK ETTEITHCEL CGILSDGFAY SSHEWSDVDV HCGSLNEPLV HDGHIHPLYF AKKEEHTCDG
501: CQKSIEDYML RCKACDFDLC LYCATLPEKI WHRNDGHPLT LCCGEKEEAS GKYWCDICEK ELDPSIWFYT CYDCGVTLHA QCVLGDFSRL VLGQIYSFGE
601: KEIEFEAVPN NINTRPFCIQ CNSRCKVSVI LKILKDSEDG SDDGSDDVSD DVSDDPSNDV SDDTSDDDSD VVSDVVSDDA SNDDSDDTSD DHNGYICSRS
701: CLSSYLGEEI

Arabidopsis Description

ULI3Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q8W2D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.