CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88733	Canola	cytosol	93.29	93.59
CDX74184	Canola	plasma membrane	33.87	51.71
CDY09238	Canola	cytosol	38.5	50.74
CDY09240	Canola	cytosol	38.5	50.74
CDY30007	Canola	cytosol, nucleus, plastid	53.19	50.08
CDY64703	Canola	cytosol	51.6	48.64
CDX74183	Canola	cytosol	26.2	47.67
CDY52927	Canola	cytosol	26.2	43.5
CDX67463	Canola	cytosol	31.31	42.24
CDY48718	Canola	cytosol	24.92	42.05
CDY06776	Canola	cytosol	18.21	40.0
CDY41709	Canola	peroxisome	33.55	39.92
CDY63290	Canola	cytosol	31.95	39.84
CDY40661	Canola	cytosol	48.4	39.76
CDY63460	Canola	cytosol, mitochondrion	25.24	37.98
CDY51540	Canola	nucleus	30.51	37.23
CDX93183	Canola	cytosol	39.46	37.09
CDY46706	Canola	mitochondrion	31.15	36.59
CDY28703	Canola	cytosol	29.07	36.55
CDY52789	Canola	cytosol	23.64	36.45
CDY69979	Canola	nucleus	36.9	36.26
CDY29992	Canola	cytosol	15.02	35.88
CDY52787	Canola	nucleus	35.78	35.5
CDY30196	Canola	cytosol	23.16	35.45
CDY27940	Canola	cytosol	31.63	35.11
CDY22034	Canola	endoplasmic reticulum	35.14	34.98
CDX97701	Canola	cytosol	11.82	34.91
CDY58516	Canola	nucleus	27.8	34.66
CDY65338	Canola	cytosol	36.9	34.48
CDY21921	Canola	plastid	20.93	34.47
CDY63456	Canola	cytosol	21.73	34.43
CDY22036	Canola	cytosol	32.59	34.23
CDY22883	Canola	cytosol	34.5	33.08
CDY60784	Canola	cytosol	17.57	32.74
CDY43524	Canola	cytosol	26.2	32.41
CDY36839	Canola	cytosol	30.99	32.07
CDY44167	Canola	cytosol	25.08	31.91
CDY36353	Canola	plastid	15.5	31.09
CDY42579	Canola	nucleus	13.58	31.02
CDY27938	Canola	cytosol	21.73	30.98
CDY29993	Canola	cytosol	29.39	29.82
CDY21132	Canola	cytosol	28.43	29.09
CDY22052	Canola	nucleus	29.07	28.75
CDY44574	Canola	cytosol	22.04	28.63
CDY50383	Canola	cytosol	37.06	27.52
KRG95394	Soybean	nucleus	23.48	25.93
KRH67075	Soybean	nucleus	23.16	25.44
CDY22035	Canola	cytosol	35.3	24.94
CDX82703	Canola	cytosol	36.42	23.63
CDY50382	Canola	cytosol	35.94	22.68

Protein Annotations

EnsemblPlants:CDX71062	EnsemblPlantsGene:GSBRNA2T00141009001	GO:A0A078C2S9	InterPro:DC1	InterPro:Znf_PHD	PFAM:PF03107
ProteinID:CDX71062	ProteinID:CDX71062.1	SEG:seg	SMART:SM00249	SUPFAM:SSF57889	UniParc:UPI0004EE068C
MapMan:35.2	:	:	:	:	:

Description

BnaC03g11460D

Coordinates

chrLK031791:-:3486314..3488511

Molecular Weight (calculated)

71896.5 Da

IEP (calculated)

6.914

GRAVY (calculated)

-0.256

Length

626 amino acids

Sequence
(BLAST)

001: MDRITSTTMY KTSFHDHPLF PSPRFVMDYC EGCITEGTIY GGYYCNDPNC SAWFFHKKCA EAPLQINQHP SHPQHLLLLR KKLGVGVCEL CGETILAPFY
101: SCSTCEFKVD LTCGMKPPPS AIEHPLCHDH PLVLLKKGKE KFPCEVCKET FGGPSYLCHE CNLYFHLDCV NLSEEVNHPC HSNHPIKLFA SENLMGDAEK
201: ICFSCEKQSE NMLYHCPTCN FSICLVCTRN PPPLVIDHAR THVHPLTLLS RTMSFTCDVC GEDGKGGPYV CLQCAFLTHG ECIDLPRIIS INRHEHRISF
301: TPHLGAGYSK CGVCRKSLNQ YHGAYSCSVC QKYATHCRCA LRNDLWDHVD LEGIPNHDAE YIAPFKKVGD DLIIHFSHEK HPLKFYKKNK ILYDKWLQCE
401: ACMYPFVFES IYGCEECRFF LHDRCANLPT KKKIAFSRKP HSLEVTNKVV TACRECRVLF DGFNYTFHGD WRVDVHCGSL CEPFIHDGHL HPLYFYKRWG
501: SSCVACEDIL HGRYMMCCDA CGFDLCLYCA SLPTKMWHKN DDHPITLHCG VKLSEKSCCE ICERELDQCK WFYTCFDCGV TFHTRCVRGE FSRLKPEKLI
601: FYEEKEFEVI EEGGQLNSLI YESMNA

Best Arabidopsis Sequence Match ( AT5G59920.1 )
(BLAST)

001: MATEAVDLPI HEHPLFPSAR CIDDECDGCH VNGFMYAGYF CNEPYCYVWF HKDCAEAPGE ISHSSHPEHP LLLTNDSKDG PCDLCGQKLL TPCYSCPTCE
101: FKVDLTCGMK PSPPAIEHPL CHDHAVVFLK IREEKVPCEL CKESIEGPSY SCLECDMYFH VNCVHLSEEV NHPCHSIHPL KLITSESLTD DAEKSCLLCG
201: NIPAENMLYH CSVCNFTSCL GCTKNPPLLV IEHMKTHKHP LTLLPRRISC ICDVCGKKCQ FTAYVCLQCD FVTARKCIDR PRVININRHD HRIYLTHHLG
301: TGYSECGVCH KNVSQYKGAY SCSVCPNYAV HSTCAVRTDV WDGVELEGTT EITEDISPFK VVGDNLICHF SHEEHQLKLH KEDVIHDERR RCEACIHPVQ
401: FGSIYVCEEE ECCFVLHEKC ANLPMKKRLV FGTRPYTLMK ETTEITHCEL CGILSDGFAY SSHEWSDVDV HCGSLNEPLV HDGHIHPLYF AKKEEHTCDG
501: CQKSIEDYML RCKACDFDLC LYCATLPEKI WHRNDGHPLT LCCGEKEEAS GKYWCDICEK ELDPSIWFYT CYDCGVTLHA QCVLGDFSRL VLGQIYSFGE
601: KEIEFEAVPN NINTRPFCIQ CNSRCKVSVI LKILKDSEDG SDDGSDDVSD DVSDDPSNDV SDDTSDDDSD VVSDVVSDDA SNDDSDDTSD DHNGYICSRS
701: CLSSYLGEEI

Arabidopsis Description

ULI3Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q8W2D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.