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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97701 Canola cytosol 39.66 75.94
AT4G01925.1 Thale cress cytosol 48.28 70.0
CDY52787 Canola nucleus 75.12 48.34
CDY69979 Canola nucleus 73.89 47.1
CDY65338 Canola cytosol 77.59 47.01
CDY22036 Canola cytosol 65.27 44.46
CDY22034 Canola endoplasmic reticulum 67.24 43.4
CDY22052 Canola nucleus 67.24 43.13
AT4G01930.1 Thale cress cytosol 67.98 42.33
AT4G01740.1 Thale cress cytosol 67.73 42.18
AT4G01910.1 Thale cress cytosol 67.24 41.94
CDY29992 Canola cytosol 26.85 41.6
CDY06776 Canola cytosol 28.82 41.05
AT4G01920.1 Thale cress cytosol 66.5 41.03
AT4G02190.1 Thale cress cytosol 65.27 40.21
CDY63460 Canola cytosol, mitochondrion 40.89 39.9
CDY21921 Canola plastid 37.19 39.74
AT4G01760.1 Thale cress cytosol 65.27 39.73
AT4G11550.1 Thale cress cytosol 63.55 38.62
AT4G11540.1 Thale cress cytosol 49.75 38.48
CDY48718 Canola cytosol 34.73 38.01
CDY52927 Canola cytosol 34.48 37.14
CDX74184 Canola plasma membrane 36.21 35.85
CDY50383 Canola cytosol 73.65 35.47
CDY22035 Canola cytosol 76.35 34.99
CDY42579 Canola nucleus 21.92 32.48
CDX74183 Canola cytosol 25.86 30.52
CDY09238 Canola cytosol 34.98 29.89
CDY09240 Canola cytosol 34.98 29.89
CDX67463 Canola cytosol 33.25 29.09
CDY50382 Canola cytosol 70.2 28.73
AT4G02180.1 Thale cress cytosol 68.97 28.31
CDY63456 Canola cytosol 26.85 27.59
AT4G11390.2 Thale cress cytosol 36.95 27.47
CDY46706 Canola mitochondrion 35.22 26.83
CDY43524 Canola cytosol 32.51 26.09
CDX93183 Canola cytosol 42.61 25.98
CDY41709 Canola peroxisome 31.77 24.52
CDY27940 Canola cytosol 33.5 24.11
CDY51540 Canola nucleus 30.3 23.98
CDY30007 Canola cytosol, nucleus, plastid 39.16 23.91
CDX88733 Canola cytosol 36.45 23.72
CDY64703 Canola cytosol 38.67 23.64
CDX71062 Canola cytosol 36.45 23.64
CDY36839 Canola cytosol 35.22 23.64
CDY30196 Canola cytosol 22.91 22.74
CDY28703 Canola cytosol 27.59 22.49
CDY22883 Canola cytosol 35.22 21.9
CDY29993 Canola cytosol 33.25 21.88
Bra036288.1-P Field mustard cytosol, nucleus, plasma membrane 89.9 21.82
CDY21132 Canola cytosol 32.76 21.73
CDY58516 Canola nucleus 26.85 21.71
CDY40661 Canola cytosol 38.92 20.73
CDY63290 Canola cytosol 25.37 20.52
CDX82703 Canola cytosol 44.58 18.76
CDY44167 Canola cytosol 22.66 18.7
CDY27938 Canola cytosol 20.2 18.68
CDY44574 Canola cytosol 17.73 14.94
KRG95394 Soybean nucleus 18.97 13.58
KRH67075 Soybean nucleus 18.47 13.16
CDY36353 Canola plastid 9.85 12.82
CDY60784 Canola cytosol 10.59 12.8
Protein Annotations
EnsemblPlants:CDY52789EnsemblPlantsGene:GSBRNA2T00007846001Gene3D:3.30.60.20GO:A0A078ITM7GO:GO:0003674GO:GO:0003824
GO:GO:0047134InterPro:DC1PFAM:PF03107ProteinID:CDY52789ProteinID:CDY52789.1SEG:seg
SUPFAM:SSF57889UniParc:UPI0004EEA27CUniProt:A0A078ITM7MapMan:35.2::
Description
BnaCnng23340DBnaCnng23340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITM7]
Coordinates
chrLK033130:-:74723..76786
Molecular Weight (calculated)
46514.6 Da
IEP (calculated)
7.336
GRAVY (calculated)
-0.365
Length
406 amino acids
Sequence
(BLAST)
001: MESEGVSLPL IHEHPMKPWN DLRKGDCCGR FVSVSDGYYC KNCDIFVHKK CGDNLSEFIV HTSHPNHTLR IRFKIGFCIC RLCGRETWNT FYRCQVCDFK
101: VDLDCAKHPP PPVIETFETH SHELTFLKGL TEFYSFHVDC LNYSPEVSHS YHSLHPLKLL TGPPPDYSDG KCRLCENEVD EELFYHCSSC NFTLDMRCVL
201: NPPPRSLVDL KAHGHQLTLL PRLFSFSCNA CGLKGDRSPY MCVQCDFMIH QDCLGLPRVI NINRHDHRVS RTSVLGVVNS VCGVCRKKVD WTCGGFSCQR
301: CPGYVVHSKC ATRDDVWNGK ELEGIPEEEE DVEPYVVVDG NTIHHFSHKE HYLRRIHGNG VLYEDNKCRC KSRCMYPIKL KLLGTSGTYA CSYFCSSYLT
401: SRGLER
Best Arabidopsis Sequence Match ( AT4G01740.1 )
(BLAST)
001: MDSEGVLMPL IHKHRMMPWN DLRRGDCCGR FESICDGYYC KICDIFVHKK CGESSEYIEH PSHPNHTLQL LSTRGNSHDC DLCGKNIGDL FYRCEICDFD
101: MDLYCAKYPP PEVINISKTH HHKLNLLKEL IQFDYCVWHP PEVNHTLEVN HSYHSLHPLK LHTGQLPNYS DRKCRLCAKE IEVGLFYHCS LCNFTLDMSC
201: VLNPPQRYLW NLKAHDHQLT LLPSLRSFLC SACGLNGDRS PYICVQCDFM IHQVCLHLPR VININRHDHR VSRTSVLGVV NSVCGVCRQK VDWTCGGFSC
301: PRCPGYAAHS LCATREDVWN GKELEGVPEE IEDIEPYVVI DDNTIQHFSH KEHYLRLHVN SVLCDDNKRC SACTHPICLQ SFYGCMDCDF ILHQNCAGFL
401: RMKWHVLHNE RLTLVTNETE VFKCYACERW SNGFRYQQGY KSFDVRCGSI SEPFFHPSHP DHPLYCILPY GKIFCNGCYK FKYGMLVCVE YECNHLICFN
501: CATLPPVVKH RVDDHPLSLC YGEKASGICW CDICEAKADP EIWFYTCKDQ RASLHTSCVL GDFSGLMPGS TLKSASNSSE VLLNNIVSRP FCSFLELMPG
601: STLESAGKSV EVGLNKSTSR PFCISCKLHC IFPIILKRLG TSDEYFCSIL CI
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZSI9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.