CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44167	Canola	cytosol	72.13	95.73
Bra033522.1-P	Field mustard	cytosol	68.91	91.65
CDY60784	Canola	cytosol	29.25	56.85
CDY30196	Canola	cytosol	24.66	39.36
CDY52927	Canola	cytosol	22.66	39.26
CDY63456	Canola	cytosol	23.74	39.24
CDX97701	Canola	cytosol	12.56	38.68
CDY41709	Canola	peroxisome	30.78	38.21
CDY46706	Canola	mitochondrion	30.93	37.9
CDY48718	Canola	cytosol	21.44	37.74
CDY06776	Canola	cytosol	16.39	37.54
CDX93183	Canola	cytosol	37.83	37.09
CDY52787	Canola	nucleus	35.68	36.93
CDY27940	Canola	cytosol	31.85	36.88
CDY51540	Canola	nucleus	28.79	36.65
CDY58516	Canola	nucleus	27.87	36.26
CDY22036	Canola	cytosol	33.08	36.24
CDY28703	Canola	cytosol	27.57	36.14
CDY63460	Canola	cytosol, mitochondrion	22.66	35.58
CDY65338	Canola	cytosol	36.45	35.52
CDY36839	Canola	cytosol	32.77	35.37
CDY52789	Canola	cytosol	21.9	35.22
CDY63290	Canola	cytosol	26.95	35.06
CDY69979	Canola	nucleus	34.15	35.01
CDY09238	Canola	cytosol	25.27	34.74
CDX88733	Canola	cytosol	33.08	34.62
CDY09240	Canola	cytosol	25.11	34.53
CDX71062	Canola	cytosol	33.08	34.5
CDX67463	Canola	cytosol	24.5	34.48
CDY21921	Canola	plastid	20.06	34.47
CDY30007	Canola	cytosol, nucleus, plastid	34.92	34.29
CDY29992	Canola	cytosol	13.63	33.97
CDY64703	Canola	cytosol	34.3	33.73
CDY27938	Canola	cytosol	22.21	33.03
CDY21132	Canola	cytosol	30.93	33.01
CDY44574	Canola	cytosol	24.35	32.99
CDY22034	Canola	endoplasmic reticulum	31.39	32.59
CDX74184	Canola	plasma membrane	20.21	32.2
CDX74183	Canola	cytosol	16.85	31.98
CDY43524	Canola	cytosol	24.5	31.62
CDY29993	Canola	cytosol	29.86	31.6
CDY40661	Canola	cytosol	34.15	29.27
CDY42579	Canola	nucleus	12.1	28.83
CDY36353	Canola	plastid	13.48	28.21
CDY50383	Canola	cytosol	35.68	27.64
CDY22035	Canola	cytosol	35.38	26.07
KRG95394	Soybean	nucleus	22.21	25.57
CDY22052	Canola	nucleus	24.5	25.28
CDX82703	Canola	cytosol	36.6	24.77
KRH67075	Soybean	nucleus	21.59	24.74
CDY50382	Canola	cytosol	34.15	22.48

Protein Annotations

MapMan:35.2	GO:A0A078GE17	UniProt:A0A078GE17	EnsemblPlants:CDY22883	ProteinID:CDY22883	ProteinID:CDY22883.1
InterPro:DC1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0035556	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00021247001	InterPro:IPR002219	InterPro:PE/DAG-bd	PFAM:PF03107	SMART:SM00109	SMART:SM00249
SUPFAM:SSF57889	UniParc:UPI0004EE5B83	InterPro:Znf_PHD	SEG:seg	:	:

Description

BnaA01g18210DBnaA01g18210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE17]

Coordinates

chrLK032137:-:76268..78229

Molecular Weight (calculated)

75746.3 Da

IEP (calculated)

6.781

GRAVY (calculated)

-0.274

Length

653 amino acids

Sequence
(BLAST)

001: MEILKKVYAL YPTRGLKCDG CNLGENYYGD GYRCFRSGIF FHKECANSSL EICNLYHPQH SLKIKVCAKN NNVQEECKVC RINLPKMYYY CSICDFAIDL
101: ICVKKEVKKE IGDSKIHEHP LSLVPEMVSF TCHLCQVLDD RFPFVCNLCD LSFHQYCAES ISEINYSCHP QHPLKRYTRV PSRTGGKCCL CGNKLHNVFY
201: HCSVCNFSVD INCVKKPPPF SLHHPKAHEH PIILMPQRSF VCNACGMDDD PNPYVCPQCN FMIHRNCVDK PQVIKINHHD HRIYYNHYLD SDDWECGVCQ
301: KEMKWTCGAY SCLKCQDFAV HLRCATKFGI WDGIELEGIS ETNIELKSYE VVEEGLIKHS GHQNHVLKLK EESDGDDEGI VCEACVYPVF CGPFYSCTEC
401: DNYILHQKCA HLPKKKIDSF YKMEITLFPC DKMETILGLC EVCQHFFQGF RYTTKDDITL DMRCGSISEP FFHESHPHHP LYIDFSGNKT CKACGDEATF
501: ILSCQECGYF LDIKCPFLPN KVKHKYDKNH FLFLCYGKDT SDQYLCEICE EELNSEKWFY RCDECCITFH IKCTLGDLIS LKQIVDAEPI KLEVIRNIHM
601: TRLVCDVCHS RCHFPYMLKC SSPLGVDTLC SLQCFRQKYF HKMTPLYELS IDY

Best Arabidopsis Sequence Match ( AT4G13992.1 )
(BLAST)

001: MSTYDKLRRY YLLYQTRGLK CDGCNLGRDY YSIGHRCFRS GLFFHNECAE SSVEIHNLYH PQHSLHIKVL KQNEDVHGEC KLCRGNLAKI YYQCSTCDFA
101: IDLICARKKV VATIEVPKTH DHPLSLIPKM ITFTCHLCGL LDDRFPYACN LCDITFHKDC AESTPEINYS CHPQHLLKRL THVPSYTDGK CCLCGSKLHN
201: LFYHCSICNF SVDVNCEKNP PSFTLFHPKA HEHKLTLMPQ RSFVCSACGM DDDPNPYVCP QCNFMIHRSC IDIPRVIKIY RHDHHICYNN FLDAGDWKCG
301: ICHKKINWTC GAYSCSECPD LVMHLRCATR FGIWNGIELE GISKNTLKVK SYEEIEEGVI KHFSHDHTLK FKEGSDGNGE CIQCTICTYP IFSNPFYSCM
401: ECDDFILHKK CVDLPKKKID SFYKMSTSLI TNYQGNAENI CNACQNIYQG FSYLSDDGNT LLDVRCGSIS EPFFHESHPH SLYVSYLTGG RFCNACREKA
501: TMVLSCEECE FVLDIKCSTL PNIVKHENDK DHLLSLCYGE NKCEQCWCEM CEETINPKKW FYSCDHCGIA FHIRCTLGDF IWFKPEKKSE SSTNCVILNN
601: RASRPFCYSC NSRCKYPSIL FFYGKTLCSL QCFQQKVYAI LA

Arabidopsis Description

Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:B3H723]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.