Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44167 | Canola | cytosol | 73.32 | 73.17 |
| CDY22883 | Canola | cytosol | 91.65 | 68.91 |
| Bra040595.1-P | Field mustard | cytosol | 30.14 | 34.5 |
| Bra028463.1-P | Field mustard | cytosol | 34.22 | 31.34 |
| Bra024127.1-P | Field mustard | nucleus | 25.87 | 31.05 |
| Bra017007.1-P | Field mustard | nucleus | 33.2 | 27.96 |
| Bra025591.1-P | Field mustard | nucleus | 32.99 | 27.41 |
| Bra011134.1-P | Field mustard | mitochondrion | 38.49 | 27.27 |
| Bra020274.1-P | Field mustard | nucleus | 32.99 | 25.88 |
| Bra040143.1-P | Field mustard | nucleus | 32.18 | 25.82 |
| Bra001113.1-P | Field mustard | cytosol | 22.2 | 23.64 |
| Bra025569.1-P | Field mustard | nucleus | 20.77 | 19.14 |
| KRG95394 | Soybean | nucleus | 21.18 | 18.34 |
| KRH67075 | Soybean | nucleus | 20.57 | 17.72 |
| Bra036288.1-P | Field mustard | cytosol, nucleus, plasma membrane | 38.09 | 11.18 |
Protein Annotations
| EnsemblPlants:Bra033522.1 | EnsemblPlants:Bra033522.1-P | EnsemblPlantsGene:Bra033522 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | InterPro:DC1 |
| InterPro:IPR002219 | InterPro:PE/DAG-bd | InterPro:Zinc_finger_PHD-type_CS | PFAM:PF03107 | ScanProsite:PS01359 | SEG:seg |
| SMART:SM00109 | SUPFAM:SSF57889 | UniParc:UPI00025448C3 | UniProt:M4EXI5 | MapMan:35.2 | : |
Description
AT4G13992 (E=6e-176) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling cascade; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein kinase C, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: DC1 domain-containing protein (TAIR:AT4G16015.1); Has 1471 Blast hits to 614 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 1295; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
Coordinates
chrA01:-:11411884..11413878
Molecular Weight (calculated)
56618.0 Da
IEP (calculated)
6.569
GRAVY (calculated)
-0.257
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MYYYCSICDF AIDLICVKKE VKKEIGDSKI HEHPLSLVPE MVSFTCHLCQ VLDDRFPFVC NLCDLSFHQY CAESISEINY SCHPQHPLKR YTRVPSRTGG
101: KCCLCGNKLH NVFYHCSVCN FSVDINCVKK PPPFSLHHPK AHEHPIILMP QRSFVCNACG MDDDPNPYVC PQCNFMIHRN CVDKPQVIKI NHHDHRIYYN
201: HYLDSDDWEC GVCQKEMKWT CGAYSCLKCQ DFAVHLRCAT KFGIWDGIEL EGISETNIEL KSYEVVEEGL IKHSGHQNHV LKLKEESDGD DEGIVCEACV
301: YPVFCGPFYS CTECDNYILH QKCAHLPKKK IDSFYKMEIT LFPCDKMETI LGLCEVCQHF FQGFRYTTKD DITLDMRCGS ISEPFFHESH PHHPLYIDFS
401: GNKTCKACGD EATFILSCQE CGYVLDIKCP FLPNKGRRVS LTFFRDLCGL RCVLFGPNNV LEDPCRYREK QDPSSAPFWS LGFITIFDLR H
101: KCCLCGNKLH NVFYHCSVCN FSVDINCVKK PPPFSLHHPK AHEHPIILMP QRSFVCNACG MDDDPNPYVC PQCNFMIHRN CVDKPQVIKI NHHDHRIYYN
201: HYLDSDDWEC GVCQKEMKWT CGAYSCLKCQ DFAVHLRCAT KFGIWDGIEL EGISETNIEL KSYEVVEEGL IKHSGHQNHV LKLKEESDGD DEGIVCEACV
301: YPVFCGPFYS CTECDNYILH QKCAHLPKKK IDSFYKMEIT LFPCDKMETI LGLCEVCQHF FQGFRYTTKD DITLDMRCGS ISEPFFHESH PHHPLYIDFS
401: GNKTCKACGD EATFILSCQE CGYVLDIKCP FLPNKGRRVS LTFFRDLCGL RCVLFGPNNV LEDPCRYREK QDPSSAPFWS LGFITIFDLR H
001: MSTYDKLRRY YLLYQTRGLK CDGCNLGRDY YSIGHRCFRS GLFFHNECAE SSVEIHNLYH PQHSLHIKVL KQNEDVHGEC KLCRGNLAKI YYQCSTCDFA
101: IDLICARKKV VATIEVPKTH DHPLSLIPKM ITFTCHLCGL LDDRFPYACN LCDITFHKDC AESTPEINYS CHPQHLLKRL THVPSYTDGK CCLCGSKLHN
201: LFYHCSICNF SVDVNCEKNP PSFTLFHPKA HEHKLTLMPQ RSFVCSACGM DDDPNPYVCP QCNFMIHRSC IDIPRVIKIY RHDHHICYNN FLDAGDWKCG
301: ICHKKINWTC GAYSCSECPD LVMHLRCATR FGIWNGIELE GISKNTLKVK SYEEIEEGVI KHFSHDHTLK FKEGSDGNGE CIQCTICTYP IFSNPFYSCM
401: ECDDFILHKK CVDLPKKKID SFYKMSTSLI TNYQGNAENI CNACQNIYQG FSYLSDDGNT LLDVRCGSIS EPFFHESHPH SLYVSYLTGG RFCNACREKA
501: TMVLSCEECE FVLDIKCSTL PNIVKHENDK DHLLSLCYGE NKCEQCWCEM CEETINPKKW FYSCDHCGIA FHIRCTLGDF IWFKPEKKSE SSTNCVILNN
601: RASRPFCYSC NSRCKYPSIL FFYGKTLCSL QCFQQKVYAI LA
101: IDLICARKKV VATIEVPKTH DHPLSLIPKM ITFTCHLCGL LDDRFPYACN LCDITFHKDC AESTPEINYS CHPQHLLKRL THVPSYTDGK CCLCGSKLHN
201: LFYHCSICNF SVDVNCEKNP PSFTLFHPKA HEHKLTLMPQ RSFVCSACGM DDDPNPYVCP QCNFMIHRSC IDIPRVIKIY RHDHHICYNN FLDAGDWKCG
301: ICHKKINWTC GAYSCSECPD LVMHLRCATR FGIWNGIELE GISKNTLKVK SYEEIEEGVI KHFSHDHTLK FKEGSDGNGE CIQCTICTYP IFSNPFYSCM
401: ECDDFILHKK CVDLPKKKID SFYKMSTSLI TNYQGNAENI CNACQNIYQG FSYLSDDGNT LLDVRCGSIS EPFFHESHPH SLYVSYLTGG RFCNACREKA
501: TMVLSCEECE FVLDIKCSTL PNIVKHENDK DHLLSLCYGE NKCEQCWCEM CEETINPKKW FYSCDHCGIA FHIRCTLGDF IWFKPEKKSE SSTNCVILNN
601: RASRPFCYSC NSRCKYPSIL FFYGKTLCSL QCFQQKVYAI LA
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:B3H723]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.